RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 OR2T1O43869 369 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 TXNDC12O95881 172 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DUX4L2P0CJ85 424 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DUX4L3P0CJ86 424 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DUX4L4P0CJ87 422 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DUX4L5P0CJ88 424 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DUX4L6P0CJ89 424 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DUX4L7P0CJ90 424 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DUX4Q9UBX2 424 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DCHS1Q96JQ0 3298 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.04□□□□□ -0.48
VHL-201ENST00000256474 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.04□□□□□ -0.48
VHL-201ENST00000256474 ZNF878C9JN71 531 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 ZNHIT1O43257 154 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 AIMP2Q13155 320 aaKnown RBP12.04□□□□□ -0.48
VHL-201ENST00000256474 TMEM244Q5VVB8 128 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 DNM1P34Q6PK57 102 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 GTPBP8Q8N3Z3 284 aaPredicted RBP12.04□□□□□ -0.48
VHL-201ENST00000256474 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 OR1N1Q8NGS0 311 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 TMEM234Q8WY98 164 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 LIN37Q96GY3 246 aaPredicted RBP12.04□□□□□ -0.48
VHL-201ENST00000256474 WDR77Q9BQA1 342 aaPredicted RBP12.04□□□□□ -0.48
VHL-201ENST00000256474 SLC25A21Q9BQT8 299 aaPredicted RBP12.04□□□□□ -0.48
VHL-201ENST00000256474 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 RHBDD3Q9Y3P4 386 aa12.04□□□□□ -0.48
VHL-201ENST00000256474 HMSDA8MTL9 139 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 FBXO24O75426 580 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 B3GALNT1O75752 331 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 IGKV3-11P04433 115 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 SERPINA2P20848 420 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 OR3A4PP47883 348 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 TDGQ13569 410 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 C14orf28Q4W4Y0 310 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 C11orf87Q6NUJ2 197 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 MRPS24Q96EL2 167 aaKnown RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 C8orf33Q9H7E9 229 aaPredicted RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 PCDHB10Q9UN67 800 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 SLC5A6Q9Y289 635 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 KCNK7Q9Y2U2 307 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 CACNA1EQ15878 2313 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 RAB3AP20336 220 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 AGTR1P30556 359 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 ZNF41P51814 821 aaPredicted RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 HNRNPKP61978 463 aaKnown RBP eCLIP12.03□□□□□ -0.48
VHL-201ENST00000256474 RNF4P78317 190 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 SCRN3Q0VDG4 424 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 TMEM176BQ3YBM2 270 aaPredicted RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 H1FNTQ75WM6 255 aaPredicted RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 FOXRED1Q96CU9 486 aaPredicted RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 CHMP1AQ9HD42 196 aaPredicted RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 GPR84Q9NQS5 396 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 MT-ATP6P00846 226 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 ITGB2P05107 769 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 VSIG8P0DPA2 414 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 PRKACAP17612 351 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 AMY2BP19961 511 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 DHPSP49366 369 aaPredicted RBP12.03□□□□□ -0.48
VHL-201ENST00000256474 TMEM229BQ8NBD8 167 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 OR1M1Q8NGA1 313 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 OR5M8Q8NGP6 311 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 ZNF519Q8TB69 540 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 SLC2A4RGQ9NR83 387 aa12.03□□□□□ -0.48
VHL-201ENST00000256474 MEGF11A6BM72 1044 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 MS4A18H0YCH9 400 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 MASP2O00187 686 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 SLC33A1O00400 549 aaPredicted RBP12.02□□□□□ -0.48
VHL-201ENST00000256474 GDF9O60383 454 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 LTBRP36941 435 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 GUCA1AP43080 201 aaPredicted RBP12.02□□□□□ -0.48
VHL-201ENST00000256474 FASLGP48023 281 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.48
VHL-201ENST00000256474 MS4A18Q3C1V0 323 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 CLVS2Q5SYC1 327 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 ZNF585AQ6P3V2 769 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 S100A13Q99584 98 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 PRRT1Q99946 306 aa12.02□□□□□ -0.48
VHL-201ENST00000256474 MRPS28Q9Y2Q9 187 aaKnown RBP12.02□□□□□ -0.48
VHL-201ENST00000256474 IGHV1OR15-9A0A0B4J2B8 117 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 F8W036 122 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 DUX1O43812 170 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 TSPAN2O60636 221 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 NME1P15531 152 aaKnown RBP12.02□□□□□ -0.49
VHL-201ENST00000256474 BLOC1S1P78537 153 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.02□□□□□ -0.49
VHL-201ENST00000256474 TMEM71Q6P5X7 295 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 ZFP82Q8N141 532 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 OR5D14Q8NGL3 314 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 PIGTQ969N2 578 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 ARPC5LQ9BPX5 153 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 SLC22A11Q9NSA0 550 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 FAM96BQ9Y3D0 163 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 C9orf170A2RU37 121 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 RAB27BO00194 218 aa12.02□□□□□ -0.49
VHL-201ENST00000256474 EIF4E2O60573 245 aaKnown RBP12.02□□□□□ -0.49
VHL-201ENST00000256474 RAMP1O60894 148 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms