RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 TPBGQ13641 420 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF169Q14929 603 aaPredicted RBP10.24□□□□□ -0.77
LIN28A-201ENST00000254231 JMJD6Q6NYC1 403 aaPredicted RBP10.24□□□□□ -0.77
LIN28A-201ENST00000254231 SFXN4Q6P4A7 337 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 RPL22L1Q6P5R6 122 aaKnown RBP10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF799Q96GE5 643 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 OR8B4Q96RC9 309 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 MMP28Q9H239 520 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 TRAV6A0A075B6T7 132 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF879B4DU55 563 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 IGHA1P01876 353 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ELK1P19419 428 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 B3GALT5-AS1P59052 145 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 PNPLA2Q96AD5 504 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ATF6BQ99941 703 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 PBOV1Q9GZY1 135 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 CMAHPQ9Y471 501 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 KIAA1549Q9HCM3 1950 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 CELSR2Q9HCU4 2923 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ARL6IP5O75915 188 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 KDM4BO94953 1096 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 CELA3BP08861 270 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 GSTT2P0CG29 244 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 GSTT2BP0CG30 244 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 KIR3DL2P43630 455 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF83P51522 516 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 EXD3Q8N9H8 876 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 SLCO5A1Q9H2Y9 848 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ELF5Q9UKW6 265 aaPredicted RBP10.24□□□□□ -0.77
LIN28A-201ENST00000254231 A6NLC8 198 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 DKK1O94907 266 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 MPIG6BO95866 241 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 TMEM225BP0DP42 221 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 SERPINA2P20848 420 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 CLDN18P56856 261 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 SNAI3Q3KNW1 292 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 SLC36A2Q495M3 483 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 TMEM81Q6P7N7 255 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 CDC20BQ86Y33 519 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 WFDC8Q8IUA0 241 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 Q8N402 240 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 OR6Q1Q8NGQ2 317 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 SETD6Q8TBK2 473 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 CELSR1Q9NYQ6 3014 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 TNRC6BQ9UPQ9 1833 aaKnown RBP10.23□□□□□ -0.77
LIN28A-201ENST00000254231 TRAV18A0A075B6X5 111 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 A0A087WZY1 265 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 E9PLN8 166 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 PIN1P1O15428 100 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 SPRY1O43609 319 aaPredicted RBP10.23□□□□□ -0.77
LIN28A-201ENST00000254231 CCNKO75909 580 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 LCN1P31025 176 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 PLP2Q04941 152 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 BAK1Q16611 211 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF544Q6NX49 715 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 FGD2Q7Z6J4 655 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 RGP1Q92546 391 aaPredicted RBP10.23□□□□□ -0.77
LIN28A-201ENST00000254231 CRNNQ9UBG3 495 aaPredicted RBP10.23□□□□□ -0.77
LIN28A-201ENST00000254231 HHLA2Q9UM44 414 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 PIGLQ9Y2B2 252 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 TEP1Q99973 2627 aaKnown RBP10.23□□□□□ -0.77
LIN28A-201ENST00000254231 hCG_1807616A0A1W2PRN6 198 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 ERVS71-1P61550 626 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 MS4A15Q8N5U1 240 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 OR6X1Q8NH79 312 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 NMNAT2Q9BZQ4 307 aa10.23□□□□□ -0.77
LIN28A-201ENST00000254231 WDR12Q9GZL7 423 aaKnown RBP10.23□□□□□ -0.77
LIN28A-201ENST00000254231 IGHV3-13P01766 116 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 IGHV3-7P01780 117 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 EIF4EP06730 217 aaKnown RBP10.22□□□□□ -0.77
LIN28A-201ENST00000254231 EPXP11678 715 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 ADH6P28332 368 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 MRPL49Q13405 166 aaKnown RBP10.22□□□□□ -0.77
LIN28A-201ENST00000254231 NKPD1Q17RQ9 610 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 Q499Y3 187 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 AKAP14Q86UN6 197 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF610Q8N9Z0 462 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 BEST4Q8NFU0 473 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 ZCCHC14Q8WYQ9 949 aaKnown RBP10.22□□□□□ -0.77
LIN28A-201ENST00000254231 RNF32Q9H0A6 362 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 SIAEQ9HAT2 523 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 TRAPPC4Q9Y296 219 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 BOLA1Q9Y3E2 137 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 TRIM64A6NGJ6 449 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 TFF1P04155 84 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 IFITM3Q01628 133 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 EMC4Q5J8M3 183 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 SLC22A24Q8N4F4 322 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 C9orf106Q8NAJ2 232 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 GJC3Q8NFK1 279 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 OR4M1Q8NGD0 313 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 OR8B12Q8NGG6 310 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 OR52N4Q8NGI2 321 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 ADAT3Q96EY9 351 aaPredicted RBP10.22□□□□□ -0.77
LIN28A-201ENST00000254231 PGLYRP3Q96LB9 341 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 FRMD6Q96NE9 622 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF649Q9BS31 505 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 PAQR5Q9NXK6 330 aaPredicted RBP10.22□□□□□ -0.77
LIN28A-201ENST00000254231 ST6GALNAC2Q9UJ37 374 aa10.22□□□□□ -0.77
LIN28A-201ENST00000254231 PCSK5Q92824 1860 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms