RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SLAMF6Q96DU3 332 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 SHARPINQ9H0F6 387 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 OR51V1Q9H2C8 321 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 CENPMQ9NSP4 180 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 ATRQ13535 2644 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 IQCF6A8MYZ5 107 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 GLCEO94923 617 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 HMGN1P05114 100 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 PAICSP22234 425 aaKnown RBP19.41■□□□□ 0.7
LSM4-201ENST00000252816 TNFSF4P23510 183 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 GSTT1P30711 240 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 SPATC1Q76KD6 591 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 DPY19L4Q7Z388 723 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 ERI1Q8IV48 349 aaKnown RBP19.41■□□□□ 0.7
LSM4-201ENST00000252816 BHLHE23Q8NDY6 225 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 OR10AD1Q8NGE0 317 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 ZNF582Q96NG8 517 aaPredicted RBP19.41■□□□□ 0.7
LSM4-201ENST00000252816 INTS14Q96SY0 518 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 COPS4Q9BT78 406 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 MARCH7Q9H992 704 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 SLC25A19Q9HC21 320 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 PAPOLBQ9NRJ5 636 aaKnown RBP19.41■□□□□ 0.7
LSM4-201ENST00000252816 LPAR3Q9UBY5 353 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 TANC2Q9HCD6 1990 aa19.41■□□□□ 0.7
LSM4-201ENST00000252816 B4DSR2 109 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 PRR23D1E9PI22 279 aaPredicted RBP19.4■□□□□ 0.7
LSM4-201ENST00000252816 H0YL77 283 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 FAM157CP0CG43 387 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 PRR23D2P0DMB1 279 aaPredicted RBP19.4■□□□□ 0.7
LSM4-201ENST00000252816 SLC6A9P48067 706 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 PRKXP51817 358 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 CR1LQ2VPA4 569 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 DRAM2Q6UX65 266 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 CPOQ8IVL8 374 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 TIGD4Q8IY51 512 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 OR6N2Q8NGY6 317 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 OR13G1Q8NGZ3 307 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 RAB1CQ92928 201 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 ZMYND19Q96E35 227 aaPredicted RBP19.4■□□□□ 0.7
LSM4-201ENST00000252816 DUS3LQ96G46 650 aaKnown RBP19.4■□□□□ 0.7
LSM4-201ENST00000252816 TIMD4Q96H15 378 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 OR2V2Q96R30 315 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 SLC30A2Q9BRI3 323 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 LPAR2Q9HBW0 351 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 KIF17Q9P2E2 1029 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 IL19Q9UHD0 177 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 AP4S1Q9Y587 144 aa19.4■□□□□ 0.7
LSM4-201ENST00000252816 FBN1P35555 2871 aaKnown RBP19.4■□□□□ 0.7
LSM4-201ENST00000252816 ZNF878C9JN71 531 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 MLNRO43193 412 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 TNFRSF1AP19438 455 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 CRISP1P54107 249 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 DVL1P1P54792 670 aaPredicted RBP19.39■□□□□ 0.69
LSM4-201ENST00000252816 SLC3A1Q07837 685 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 MALLQ13021 153 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 EIF2B1Q14232 305 aaKnown RBP19.39■□□□□ 0.69
LSM4-201ENST00000252816 TAF13Q15543 124 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 ASRGL1Q7L266 308 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 AMIGO2Q86SJ2 522 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 ZNF283Q8N7M2 679 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 BBS1Q8NFJ9 593 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 DNAJC9Q8WXX5 260 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 AMELYQ99218 206 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 KCNJ15Q99712 375 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 ZNF665Q9H7R5 613 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 TMEM106BQ9NUM4 274 aa19.39■□□□□ 0.69
LSM4-201ENST00000252816 MXRA5Q9NR99 2828 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 A0A1B0GWJ7 208 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 MITFO75030 526 aaPredicted RBP19.38■□□□□ 0.69
LSM4-201ENST00000252816 DYSFO75923 2080 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 SLC2A1P11166 492 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 SELEP16581 610 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 FASP25445 335 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 ZNF92Q03936 586 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 PGAP1Q75T13 922 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 PARP8Q8N3A8 854 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 OR2AE1Q8NHA4 323 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 MEGF10Q96KG7 1140 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 ABHD6Q9BV23 337 aa19.38■□□□□ 0.69
LSM4-201ENST00000252816 G3V2T6 193 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 SELENOFO60613 162 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 IGHV2-5P01817 119 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 MSMBP08118 114 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 SLC2A5P22732 501 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 KLHL12Q53G59 568 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 GLYATL3Q5SZD4 288 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 ZNF771Q7L3S4 317 aaPredicted RBP19.37■□□□□ 0.69
LSM4-201ENST00000252816 MRPL21Q7Z2W9 205 aaKnown RBP19.37■□□□□ 0.69
LSM4-201ENST00000252816 RNF133Q8WVZ7 376 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 LRTOMTQ8WZ04 291 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 SIGLEC11Q96RL6 698 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 GCM1Q9NP62 436 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 TMEM100Q9NV29 134 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 TVP23BQ9NYZ1 205 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 TMEFF2Q9UIK5 374 aaPredicted RBP19.37■□□□□ 0.69
LSM4-201ENST00000252816 PPP1R3CQ9UQK1 317 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 N6AMT1Q9Y5N5 214 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 NPTNQ9Y639 398 aa19.37■□□□□ 0.69
LSM4-201ENST00000252816 F5H5P2 479 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 PRODHO43272 600 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms