RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 KCNJ15Q99712 375 aa10.85□□□□□ -0.67
VPREB3-201ENST00000248948 MED20Q9H944 212 aa10.85□□□□□ -0.67
VPREB3-201ENST00000248948 MSL2Q9HCI7 577 aa10.85□□□□□ -0.67
VPREB3-201ENST00000248948 A0A1B0GWJ7 208 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 ZAR1LA6NP61 321 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 ZNF593O00488 134 aaPredicted RBP10.84□□□□□ -0.67
VPREB3-201ENST00000248948 APOC1P02654 83 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 LCATP04180 440 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 TNFRSF1AP19438 455 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 IGFBP5P24593 272 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 COL8A2P25067 703 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 EIF2B1Q14232 305 aaKnown RBP10.84□□□□□ -0.67
VPREB3-201ENST00000248948 GK2Q14410 553 aaPredicted RBP10.84□□□□□ -0.67
VPREB3-201ENST00000248948 PTGES3Q15185 160 aaKnown RBP10.84□□□□□ -0.67
VPREB3-201ENST00000248948 TRIP10Q15642 601 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 LCN1P1Q5VSP4 162 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 SLX4IPQ5VYV7 408 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 FAM166AQ6J272 317 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 CXXC5Q7LFL8 322 aaKnown RBP10.84□□□□□ -0.67
VPREB3-201ENST00000248948 DPY19L4Q7Z388 723 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 C10orf67Q8IYJ2 551 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 OR8G5Q8NG78 346 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 RNF133Q8WVZ7 376 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 ZNF582Q96NG8 517 aaPredicted RBP10.84□□□□□ -0.67
VPREB3-201ENST00000248948 GABARAPL3Q9BY60 117 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 OR51V1Q9H2C8 321 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 YAE1D1Q9NRH1 226 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 IL19Q9UHD0 177 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
VPREB3-201ENST00000248948 LRP5LA4QPB2 252 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 XRCC2O43543 280 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 CDC14BO60729 498 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 CRLF1O75462 422 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 LYNP07948 512 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 HSD11B1P28845 292 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 CDH15P55291 814 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 HLXQ14774 488 aaPredicted RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 KPNB1Q14974 876 aaKnown RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 TAF13Q15543 124 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 SNAPC1Q16533 368 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 SNAI3Q3KNW1 292 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 KLHL12Q53G59 568 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 TMEM236Q5W0B7 351 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 C12orf73Q69YU5 71 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 Q6ZR03 302 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 PGAP1Q75T13 922 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 MRPL21Q7Z2W9 205 aaKnown RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 AMIGO2Q86SJ2 522 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 OR2Z1Q8NG97 314 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 CLDND2Q8NHS1 167 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 OTOSQ8NHW6 89 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 PYDC1Q8WXC3 89 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 MSI2Q96DH6 328 aaKnown RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 ZMYND19Q96E35 227 aaPredicted RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 TIMD4Q96H15 378 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 RAB3IPQ96QF0 476 aaPredicted RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 CIB1Q99828 191 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 SLC30A2Q9BRI3 323 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 ABHD6Q9BV23 337 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 SP140LQ9H930 580 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 LPAR3Q9UBY5 353 aa10.83□□□□□ -0.68
VPREB3-201ENST00000248948 NOP16Q9Y3C1 178 aaKnown RBP10.83□□□□□ -0.68
VPREB3-201ENST00000248948 H3BNX3 289 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 IFNL4K9M1U5 179 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 OPRL1P41146 370 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 CX3CR1P49238 355 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
VPREB3-201ENST00000248948 OR2T2Q6IF00 324 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 OR5AS1Q8N127 324 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 OR13G1Q8NGZ3 307 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 RAB1CQ92928 201 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 RAB39BQ96DA2 213 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 OR2V2Q96R30 315 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 RBM4BQ9BQ04 359 aaKnown RBP10.82□□□□□ -0.68
VPREB3-201ENST00000248948 SLC22A4Q9H015 551 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 SEMA6AQ9H2E6 1030 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 CENPMQ9NSP4 180 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 TVP23BQ9NYZ1 205 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 TMEFF2Q9UIK5 374 aaPredicted RBP10.82□□□□□ -0.68
VPREB3-201ENST00000248948 CDC42EP3Q9UKI2 254 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 KCNS2Q9ULS6 477 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 WIPI2Q9Y4P8 454 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 CACNG2Q9Y698 323 aa10.82□□□□□ -0.68
VPREB3-201ENST00000248948 LOC100289279A0A1B0GTE1 492 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 SLC22A31A6NKX4 558 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 PRKYO43930 277 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 SELENOFO60613 162 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 MITFO75030 526 aaPredicted RBP10.81□□□□□ -0.68
VPREB3-201ENST00000248948 IL2RGP31785 369 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 NAA10P41227 235 aaPredicted RBP10.81□□□□□ -0.68
VPREB3-201ENST00000248948 SRP9P49458 86 aaKnown RBP10.81□□□□□ -0.68
VPREB3-201ENST00000248948 PSMA6P60900 246 aaKnown RBP10.81□□□□□ -0.68
VPREB3-201ENST00000248948 ZNF92Q03936 586 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 APOFQ13790 326 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 GLYATL3Q5SZD4 288 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms