RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PGA3P0DJD8 388 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 COX6A1P12074 109 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 OTX2P32243 289 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 P2RY4P51582 365 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 SGCAQ16586 387 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 NHLRC1Q6VVB1 395 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 MRPL13Q9BYD1 178 aaKnown RBP13.99□□□□□ -0.17
LRFN1-201ENST00000248668 CLEC4MQ9H2X3 399 aaPredicted RBP13.99□□□□□ -0.17
LRFN1-201ENST00000248668 FAM206AQ9NX38 181 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 LOC100509620A0A075B734 347 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 ABOP16442 354 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 POLR2GP62487 172 aaKnown RBP eCLIP13.99□□□□□ -0.17
LRFN1-201ENST00000248668 IL11RAQ14626 422 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF600Q6ZNG1 722 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 OR2AJ1Q8NGZ0 328 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 RNF138Q8WVD3 245 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 CYYR1Q96J86 154 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 FAM71F1Q96KD3 344 aaPredicted RBP13.99□□□□□ -0.17
LRFN1-201ENST00000248668 WDPCPO95876 746 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 TDGF1P13385 188 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 ACHEP22303 614 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 MRPS10P82664 201 aaKnown RBP13.98□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF704Q6ZNC4 412 aaPredicted RBP13.98□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF436Q9C0F3 470 aaPredicted RBP13.98□□□□□ -0.17
LRFN1-201ENST00000248668 CNTD2Q9H8S5 307 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 FARSAQ9Y285 508 aaKnown RBP13.98□□□□□ -0.17
LRFN1-201ENST00000248668 AUP1Q9Y679 476 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 MEIKINA0A087WXM9 373 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 CCDC163A0A0D9SF12 145 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 NAP1L6A6NFF2 107 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 NDUFA2O43678 99 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 AQP8O94778 261 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 VSIG10L2P0DP72 767 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 RRASP10301 218 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 IGFBP3P17936 291 aaPredicted RBP13.98□□□□□ -0.17
LRFN1-201ENST00000248668 OLFML2AQ68BL7 652 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 FAM166AQ6J272 317 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 ABHD12BQ7Z5M8 362 aaPredicted RBP13.98□□□□□ -0.17
LRFN1-201ENST00000248668 C1orf210Q8IVY1 113 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 CHST4Q8NCG5 386 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 OR6S1Q8NH40 331 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 CHST6Q9GZX3 395 aa13.98□□□□□ -0.17
LRFN1-201ENST00000248668 NSG1A0A0A6YYJ2 146 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 DKK1O94907 266 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 LIPCP11150 499 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF273Q14593 569 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 TMEM244Q5VVB8 128 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 OR1J2Q8NGS2 313 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 RANBP3Q9H6Z4 567 aaPredicted RBP13.97□□□□□ -0.17
LRFN1-201ENST00000248668 A0A1B0GVI7 797 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 C5orf63A6NC05 138 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 NDUFB6O95139 128 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 LDOC1O95751 146 aaPredicted RBP13.97□□□□□ -0.17
LRFN1-201ENST00000248668 TPOP07202 933 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 ANGPT1Q15389 498 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 LGALSLQ3ZCW2 172 aaPredicted RBP13.97□□□□□ -0.17
LRFN1-201ENST00000248668 ELFN2Q5R3F8 820 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 THEM4Q5T1C6 240 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 METTL11BQ5VVY1 283 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 LRRC18Q8N456 261 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 OR4S1Q8NGB4 309 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF319Q9P2F9 582 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 UBQLN2Q9UHD9 624 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 A0A1W2PNV4 684 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 PMPCAQ10713 525 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 PCK2Q16822 640 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 NKPD1Q17RQ9 610 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 FIP1L1Q6UN15 594 aaKnown RBP13.97□□□□□ -0.17
LRFN1-201ENST00000248668 GLDNQ6ZMI3 551 aaPredicted RBP13.97□□□□□ -0.17
LRFN1-201ENST00000248668 TMED4Q7Z7H5 227 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 OR6N1Q8NGY5 312 aa13.97□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF385AQ96PM9 386 aaKnown RBP13.97□□□□□ -0.17
LRFN1-201ENST00000248668 TINAGL1Q9GZM7 467 aaPredicted RBP13.97□□□□□ -0.17
LRFN1-201ENST00000248668 A0A0G2JMM0 328 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 A0A1W2PPB8 328 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 A0A1W2PRS3 328 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 KIR3DP1A8MWS1 328 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 CER1O95813 267 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 RAG2P55895 527 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 PSMA6P60900 246 aaKnown RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 SLC25A53Q5H9E4 307 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 ADGRE4PQ86SQ3 457 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 NAA40Q86UY6 237 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 RPS19BP1Q86WX3 136 aaKnown RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 FTMTQ8N4E7 242 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 NPRL2Q8WTW4 380 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 THRSPQ92748 146 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 IMMP1LQ96LU5 166 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 TMEM138Q9NPI0 162 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF275Q9NSD4 429 aaPredicted RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 HPF1Q9NWY4 346 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 DKKL1Q9UK85 242 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 MYO7BQ6PIF6 2116 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 A0A1B0GUH1 482 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 ETV2O00321 342 aaPredicted RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 NTN3O00634 580 aaPredicted RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 RGS11O94810 467 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 UBCP0CG48 685 aaKnown RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 NUP62P37198 522 aaPredicted RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 MMP16P51512 607 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms