RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SOX7Q9BT81 388 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 ZDHHC11Q9H8X9 412 aa20.53■□□□□ 0.88
SYNGR3-201ENST00000248121 IGF2RP11717 2491 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 LINC01387J3KSC0 135 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 CYTIPO60759 359 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 SLC6A1P30531 599 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 POU3F4P49335 361 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 HIST1H3AP68431 136 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 SLC10A1Q14973 349 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 HIST2H3PS2Q5TEC6 136 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 HIST2H3AQ71DI3 136 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 KRT74Q7RTS7 529 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 OR8B12Q8NGG6 310 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 OR51E1Q8TCB6 317 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 FGGYQ96C11 551 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 ADAT3Q96EY9 351 aaPredicted RBP20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 MOB1AQ9H8S9 216 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 CACNA1GO43497 2377 aa20.52■□□□□ 0.88
SYNGR3-201ENST00000248121 SYT7O43581 403 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 GUCA1AP43080 201 aaPredicted RBP20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 CX3CR1P49238 355 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 SPOCK1Q08629 439 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 RAB11BQ15907 218 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 PLET1Q6UQ28 207 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 LINGO2Q7L985 606 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 AKAP14Q86UN6 197 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 OR1J2Q8NGS2 313 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 FAM3DQ96BQ1 224 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 ACKR4Q9NPB9 350 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 CGGBP1Q9UFW8 167 aaPredicted RBP20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 RHBDD3Q9Y3P4 386 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 CACNG2Q9Y698 323 aa20.52■□□□□ 0.87
SYNGR3-201ENST00000248121 TRAV17A0A0B4J275 112 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 E9PLN8 166 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 ACOT7O00154 380 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 PTHLHP12272 177 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 C2orf76Q3KRA6 126 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 AAED1Q7RTV5 226 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 SIAH3Q8IW03 269 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 NPAP1Q9NZP6 1156 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 RABL2AQ9UBK7 228 aaPredicted RBP20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 RABL2BQ9UNT1 228 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 N6AMT1Q9Y5N5 214 aa20.51■□□□□ 0.87
SYNGR3-201ENST00000248121 C5orf63A6NC05 138 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 CTSSP25774 331 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 MRPS34P82930 218 aaKnown RBP20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 RSPO1Q2MKA7 263 aaPredicted RBP20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 PLA1AQ53H76 456 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 CCDC92Q53HC0 331 aaPredicted RBP20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 TMEM69Q5SWH9 247 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 GLT8D1Q68CQ7 371 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 GJC3Q8NFK1 279 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 ITPKCQ96DU7 683 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 FBXO17Q96EF6 278 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 CRLF2Q9HC73 371 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 SLC5A6Q9Y289 635 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 PIEZO1Q92508 2521 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 GRB2P62993 217 aaKnown RBP20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 GALK2Q01415 458 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 GLYATL3Q5SZD4 288 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 TOMM5Q8N4H5 51 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 LDAHQ9H6V9 325 aa20.5■□□□□ 0.87
SYNGR3-201ENST00000248121 ORC5O43913 435 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 ZNF24P17028 368 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 MNDAP41218 407 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 ZNF84P51523 738 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 KLF9Q13886 244 aaPredicted RBP20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 FAM27BQ5VT28 67 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 LUZP2Q86TE4 346 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 NAA40Q86UY6 237 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 OR52I2Q8NH67 350 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 ALKBH3Q96Q83 286 aaPredicted RBP20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 MARVELD1Q9BSK0 173 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 TRGV5A0A0B4J1U4 118 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 LOC100289279A0A1B0GTE1 492 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 TMEM272A0A1B0GTI8 110 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 LOC390937A0A1W2PQ73 354 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 GDNFP39905 211 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 TAS2R20P59543 309 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 ANKRD16Q6P6B7 361 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 ZNF813Q6ZN06 617 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 ZNF283Q8N7M2 679 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 TAAR6Q96RI8 345 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 EXO5Q9H790 373 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 PLEKHA1Q9HB21 404 aa20.49■□□□□ 0.87
SYNGR3-201ENST00000248121 PTPRQQ9UMZ3 2332 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 FREM1Q5H8C1 2179 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 MEGF11A6BM72 1044 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 SULT1B1O43704 296 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 CTAG2O75638 210 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 HTR2CP28335 458 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 PDSS1Q5T2R2 415 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 RSBN1Q5VWQ0 802 aaPredicted RBP20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 ZNF529Q6P280 563 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 FAM57BQ71RH2 274 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 SLC7A6Q92536 515 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 GPR84Q9NQS5 396 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 LUZP4Q9P127 313 aa20.48■□□□□ 0.87
SYNGR3-201ENST00000248121 A0A1B0GVI7 797 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms