RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PDCD5O14737 125 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 COX5BP10606 129 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 GABRB1P18505 474 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 SLC2A5P22732 501 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 SORDQ00796 357 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 CCDC58Q4VC31 144 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 DOK3Q7L591 496 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 FAM222BQ8WU58 562 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 FAM192AQ9GZU8 254 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 UBTD1Q9HAC8 227 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 ENPP5Q9UJA9 477 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 INTS1Q8N201 2190 aaKnown RBP9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 DOCK7Q96N67 2140 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 GAAP10253 952 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 MLLT11Q13015 90 aaPredicted RBP9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 HSD17B12Q53GQ0 312 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 C1orf174Q8IYL3 243 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 JAGN1Q8N5M9 183 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 SEMA6DQ8NFY4 1073 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR5D14Q8NGL3 314 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 GHSRQ92847 366 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 PLK3Q9H4B4 646 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 GPR84Q9NQS5 396 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 DECR2Q9NUI1 292 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 SLC22A13Q9Y226 551 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 EPXP11678 715 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 CD40P25942 277 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 MOB3CQ70IA8 216 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 LINGO2Q7L985 606 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 CSNK2A3Q8NEV1 391 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR2G2Q8NGZ5 317 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNRF4Q8WWF5 429 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 ISG20L2Q9H9L3 353 aaKnown RBP9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 FZR1Q9UM11 496 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 CECR9P0C854 216 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 COX5AP20674 150 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 SERPINB10P48595 397 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 KLF3P57682 345 aaPredicted RBP9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 NAAAQ02083 359 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 PLCXD3Q63HM9 321 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 KBTBD8Q8NFY9 601 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 BORCS8Q96FH0 119 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR5M11Q96RB7 305 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 EGLN1Q9GZT9 426 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 TPK1Q9H3S4 243 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 KCNN3Q9UGI6 736 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF391Q9UJN7 358 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 UGT2A1Q9Y4X1 527 aa9.69□□□□□ -0.86
TNFAIP3-201ENST00000237289 ATP6V1G2-DDX39BF2Z307 99 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 CGAP01215 116 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 UCP2P55851 309 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ITLN2Q8WWU7 325 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 MAP6Q96JE9 813 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 KCTD7Q96MP8 289 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 CISD1Q9NZ45 108 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 MRM2Q9UI43 246 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 PIGLQ9Y2B2 252 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 RGS9O75916 674 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 NR4A1P22736 598 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 DDOSTP39656 456 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF85Q03923 595 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 CNN3Q15417 329 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 CDONQ4KMG0 1287 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF684Q5T5D7 378 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 PDCD1LG2Q9BQ51 273 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 MRPS18AQ9NVS2 196 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ACOD1A6NK06 481 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 LIMS3P0CW19 117 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 LIMS4P0CW20 117 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 PSMD7P51665 324 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 BSPH1Q075Z2 132 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 NPRL2Q8WTW4 380 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 CMBLQ96DG6 245 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR10A4Q9H209 315 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ATPIF1Q9UII2 106 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 SLC25A15Q9Y619 301 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ARPC4-TTLL3A0A0A6YYG9 625 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 LOC107986453A0A1B0GWG9 222 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ACHEP22303 614 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 ACSM3Q53FZ2 586 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 RHOUQ7L0Q8 258 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 CCDC54Q8NEL0 328 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 NMD3Q96D46 503 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 PELI1Q96FA3 418 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 DDOQ99489 341 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 TBCCD1Q9NVR7 557 aa9.68□□□□□ -0.86
TNFAIP3-201ENST00000237289 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 IGHA1P01876 353 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 RAB3AP20336 220 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 OPRL1P41146 370 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 CCDC92Q53HC0 331 aaPredicted RBP9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR2T2Q6IF00 324 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 CPEB3Q8NE35 698 aaKnown RBP9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR2AE1Q8NHA4 323 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 SYT3Q9BQG1 590 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 KLHDC2Q9Y2U9 406 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 POU3F4P49335 361 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR8G1Q15617 311 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
TNFAIP3-201ENST00000237289 GLT8D1Q68CQ7 371 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms