RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 RAC2P15153 192 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 TUBG1P23258 451 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 OTX1P32242 354 aaPredicted RBP10.79□□□□□ -0.68
LSM5-201ENST00000223084 KRTAP1-1Q07627 177 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 HNRNPA0Q13151 305 aaKnown RBP10.79□□□□□ -0.68
LSM5-201ENST00000223084 SNAI3Q3KNW1 292 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 ZIK1Q3SY52 487 aaPredicted RBP10.79□□□□□ -0.68
LSM5-201ENST00000223084 SPRNQ5BIV9 151 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 FBXW12Q6X9E4 464 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 Q6ZR03 302 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 SHFQ7M4L6 423 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 PQLC1Q8N2U9 271 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 CBR4Q8N4T8 237 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 ZNF283Q8N7M2 679 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 TMEM163Q8TC26 289 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 THEM6Q8WUY1 208 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 RDH5Q92781 318 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 TEAD3Q99594 435 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 KCNJ15Q99712 375 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 PRRG3Q9BZD7 231 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 TUBG2Q9NRH3 451 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 USE1Q9NZ43 259 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 TREM2Q9NZC2 230 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 ENOPH1Q9UHY7 261 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 ABCA2Q9BZC7 2435 aa10.79□□□□□ -0.68
LSM5-201ENST00000223084 IGHV4-61A0A0C4DH41 118 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 NDUFS8O00217 210 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 LILRA1O75019 489 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 USF1P22415 310 aaPredicted RBP10.78□□□□□ -0.68
LSM5-201ENST00000223084 GIFP27352 417 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 RBMXP38159 391 aaKnown RBP10.78□□□□□ -0.68
LSM5-201ENST00000223084 LOXL1Q08397 574 aaPredicted RBP10.78□□□□□ -0.68
LSM5-201ENST00000223084 RIN1Q13671 783 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 GK2Q14410 553 aaPredicted RBP10.78□□□□□ -0.68
LSM5-201ENST00000223084 PCGF3Q3KNV8 242 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 AADACL4Q5VUY2 407 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 DRAM2Q6UX65 266 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 USP51Q70EK9 711 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 OR2AE1Q8NHA4 323 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 OTOSQ8NHW6 89 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 RNF133Q8WVZ7 376 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 SLC29A1Q99808 456 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 CYSLTR2Q9NS75 346 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 ZNF275Q9NSD4 429 aaPredicted RBP10.78□□□□□ -0.68
LSM5-201ENST00000223084 DECR2Q9NUI1 292 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 NKIRAS2Q9NYR9 191 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 CACNG2Q9Y698 323 aa10.78□□□□□ -0.68
LSM5-201ENST00000223084 SONP18583 2426 aaKnown RBP10.77□□□□□ -0.68
LSM5-201ENST00000223084 LRP5LA4QPB2 252 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 TBX1O43435 398 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 RP2O75695 350 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 HEXAP06865 529 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 LYNP07948 512 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 LIPAP38571 399 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 OPRL1P41146 370 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 CX3CR1P49238 355 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 ALDH3A2P51648 485 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 GRB2P62993 217 aaKnown RBP10.77□□□□□ -0.69
LSM5-201ENST00000223084 CDK5R2Q13319 367 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 TRIP10Q15642 601 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 GLYATL3Q5SZD4 288 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 LCN1P1Q5VSP4 162 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 MEPCEQ7L2J0 689 aaKnown RBP10.77□□□□□ -0.69
LSM5-201ENST00000223084 SLC16A9Q7RTY1 509 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 BHLHE23Q8NDY6 225 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 OR2Z1Q8NG97 314 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 STMN2Q93045 179 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 UBE2FQ969M7 185 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 TTTY10Q9BZA0 68 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 CHODLQ9H9P2 273 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 SAP30LQ9HAJ7 183 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 BRD7Q9NPI1 651 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 DNAJC27Q9NZQ0 273 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 H2AFY2Q9P0M6 372 aaPredicted RBP10.77□□□□□ -0.69
LSM5-201ENST00000223084 ZDHHC8Q9ULC8 765 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 COPS3Q9UNS2 423 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 ORC6Q9Y5N6 252 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 FN1P02751 2386 aaKnown RBP10.77□□□□□ -0.69
LSM5-201ENST00000223084 HIVEP2P31629 2446 aa10.77□□□□□ -0.69
LSM5-201ENST00000223084 MALRD1Q5VYJ5 2156 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 IGHV1-69-2A0A0G2JMI3 117 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 IQCF6A8MYZ5 107 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 H0YL77 283 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 PSMD9O00233 223 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 ANXA2P07355 339 aaKnown RBP10.76□□□□□ -0.69
LSM5-201ENST00000223084 ADH4P08319 380 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 H2BFMP0C1H6 154 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 ALOX5APP20292 161 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 ACHEP22303 614 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 HSD11B1P28845 292 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 SLC15A1P46059 708 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 ZNF121P58317 390 aaPredicted RBP10.76□□□□□ -0.69
LSM5-201ENST00000223084 TNFAIP6P98066 277 aaPredicted RBP10.76□□□□□ -0.69
LSM5-201ENST00000223084 ZNF92Q03936 586 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 MALLQ13021 153 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 TMEM249Q2WGJ8 235 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 NXNL2Q5VZ03 156 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 LRRN1Q6UXK5 716 aa10.76□□□□□ -0.69
LSM5-201ENST00000223084 ZBTB49Q6ZSB9 765 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms