RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 OPRM1P35372 400 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 PLXDC2Q6UX71 529 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 RBMS3Q6XE24 437 aaKnown RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 GPR32P1Q8NGA4 272 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 RDH5Q92781 318 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 SARAFQ96BY9 339 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 RTL8AQ9BWD3 113 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 UFSP2Q9NUQ7 469 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 SLCO1C1Q9NYB5 712 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 CNOT1A5YKK6 2376 aaKnown RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 C4orf47A7E2U8 309 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 SDCBPO00560 298 aaPredicted RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 GMDSO60547 372 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 NRASP01111 189 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 GIPP09681 153 aaPredicted RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 CTXN2P0C2S0 81 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 AKR1C1Q04828 323 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 ZNF628Q5EBL2 1059 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 C12orf73Q69YU5 71 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 SLC38A9Q8NBW4 561 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 OR10J5Q8NHC4 309 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 H1FXQ92522 213 aaKnown RBP10.41□□□□□ -0.74
NOD1-201ENST00000222823 DERL3Q96Q80 235 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
NOD1-201ENST00000222823 IL2RAP01589 272 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 EPXP11678 715 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 NFYBP25208 207 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 RFC3P40938 356 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 PXT1Q8NFP0 134 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 CADM4Q8NFZ8 388 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 USB1Q9BQ65 265 aaKnown RBP10.4□□□□□ -0.74
NOD1-201ENST00000222823 PBOV1Q9GZY1 135 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 UNC13CQ8NB66 2214 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 IGHA2P01877 340 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 EIF4EP06730 217 aaKnown RBP10.4□□□□□ -0.74
NOD1-201ENST00000222823 PRKACAP17612 351 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 M6PRP20645 277 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 RFX2P48378 723 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 CCL7P80098 99 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 ZNF92Q03936 586 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 FZD2Q14332 565 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 PRSS41Q7RTY9 318 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 SLC30A7Q8NEW0 376 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 OR4Q3Q8NH05 313 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.4□□□□□ -0.74
NOD1-201ENST00000222823 MED18Q9BUE0 208 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 ARRDC1-AS1Q9H2J1 176 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 DECR2Q9NUI1 292 aa10.4□□□□□ -0.74
NOD1-201ENST00000222823 GDF2Q9UK05 429 aaPredicted RBP10.4□□□□□ -0.74
NOD1-201ENST00000222823 PIKFYVEQ9Y2I7 2098 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 A0A087WZY1 265 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 IGHV3-15A0A0B4J1V0 119 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 A0A0B4J2E0 115 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 IGHV3-64DA0A0J9YX35 117 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 A0A1B0GX12 115 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 TNFSF15O95150 251 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 PDGFAP04085 211 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 GABRB1P18505 474 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 ABCD3P28288 659 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 PPIAP62937 165 aaKnown RBP10.4□□□□□ -0.75
NOD1-201ENST00000222823 C1orf53Q5VUE5 145 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 LAIR1Q6GTX8 287 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 KCNE4Q8WWG9 221 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.75
NOD1-201ENST00000222823 HIPK2Q9H2X6 1198 aa10.4□□□□□ -0.75
NOD1-201ENST00000222823 hCG_1809904A0A1W2PP81 198 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 A0A1W2PPE2 198 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 A0A1W2PR64 198 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 A0A1W2PRV1 198 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 C5orf49A4QMS7 147 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 LRRC30A6NM36 301 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 HRO43593 1189 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 TGM6O95932 706 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 NKX2-1P43699 371 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 HOXA1P49639 335 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 PCBP4P57723 403 aaKnown RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 BAXQ07812 192 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 OR8G1Q15617 311 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 ESCO2Q56NI9 601 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZNF468Q5VIY5 522 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZNF808Q8N4W9 903 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZNF2Q9BSG1 426 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 MMP25Q9NPA2 562 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 IGHV5-51A0A0C4DH38 117 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 PRRG2O14669 202 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 CRYAAP02489 173 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 CD3DP04234 171 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 INHBBP09529 407 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 FAM109BQ6ICB4 259 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 TMEM92Q6UXU6 159 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 VN1R4Q7Z5H5 301 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 DAZAP1Q96EP5 407 aaKnown RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZC3HAV1LQ96H79 300 aaKnown RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 FLVCR1Q9Y5Y0 555 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 WDR1O75083 606 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 DFFBO76075 338 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 ARR3P36575 388 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms