RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KIF25Q9UIL4 384 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 IGLV1-36A0A0B4J1U3 117 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 CLRN1P58418 232 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 RNF4P78317 190 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 HSF1Q00613 529 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ELAVL1Q15717 326 aaKnown RBP13.44□□□□□ -0.26
EFNB1-201ENST00000204961 SGCBQ16585 318 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 GLIPR1L1Q6UWM5 242 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ZFP82Q8N141 532 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 C2CD4CQ8TF44 421 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ETV7Q9Y603 341 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 TRBV5-7A0A0A0MS05 114 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 TRAV14DV4A0A0A6YYC5 116 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF705EA8MWA4 302 aaPredicted RBP13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF814B7Z6K7 855 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 FBXO24O75426 580 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 FARS2O95363 451 aaKnown RBP13.44□□□□□ -0.26
EFNB1-201ENST00000204961 MC2RQ01718 297 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 IL10RAQ13651 578 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ELFN2Q5R3F8 820 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 LY6G6FQ5SQ64 297 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 BVESQ8NE79 360 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 OR13C8Q8NGS7 320 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ELP5Q8TE02 316 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 WBP1Q96G27 269 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 METTL8Q9H825 291 aaKnown RBP13.44□□□□□ -0.26
EFNB1-201ENST00000204961 SLC39A1Q9NY26 324 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 PPP4R1LQ9P1A2 415 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 TTC28Q96AY4 2481 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 KRBOX1C9JBD0 128 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 MS4A18H0YCH9 400 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 GPR31O00270 319 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 SULT1B1O43704 296 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 WDPCPO95876 746 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 HOXC4P09017 264 aaPredicted RBP13.43□□□□□ -0.26
EFNB1-201ENST00000204961 PNLIPP16233 465 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 SLC26A5P58743 744 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 EGR3Q06889 387 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 MS4A18Q3C1V0 323 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 IGSF11Q5DX21 431 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 PHF19Q5T6S3 580 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 OR10R2Q8NGX6 335 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 SCARB1Q8WTV0 552 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 SLC19A3Q9BZV2 496 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 ADAM19Q9H013 955 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 CHMP1AQ9HD42 196 aaPredicted RBP13.43□□□□□ -0.26
EFNB1-201ENST00000204961 KCNK7Q9Y2U2 307 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 WIPF3A6NGB9 483 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 FRG2CA6NGY1 282 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 BET1O15155 118 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 IGHV3-9P01782 118 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 DHPSP49366 369 aaPredicted RBP13.43□□□□□ -0.26
EFNB1-201ENST00000204961 ACTBP60709 375 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 ACTG1P63261 375 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 ADGRE4PQ86SQ3 457 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 OR1S1Q8NH92 325 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 HRH4Q9H3N8 390 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF319Q9P2F9 582 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 FAM96BQ9Y3D0 163 aa13.43□□□□□ -0.26
EFNB1-201ENST00000204961 METTL21EPA6NDL7 271 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 IGKV3-11P04433 115 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 SERPINF1P36955 418 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 LINC00518Q8N0U6 118 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 OR1S2Q8NGQ3 325 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 GPX8Q8TED1 209 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 TREM1Q9NP99 234 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 GPR84Q9NQS5 396 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 EXOSC3Q9NQT5 275 aaKnown RBP13.42□□□□□ -0.26
EFNB1-201ENST00000204961 PRMT8Q9NR22 394 aaPredicted RBP13.42□□□□□ -0.26
EFNB1-201ENST00000204961 IGHV1OR21-1A0A087WYE8 117 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 GABRR1P24046 479 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF93P35789 620 aaPredicted RBP13.42□□□□□ -0.26
EFNB1-201ENST00000204961 ID4P47928 161 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 LPAL2Q16609 132 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 OR2AJ1Q8NGZ0 328 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 THAP6Q8TBB0 222 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 RBM24Q9BX46 236 aaKnown RBP13.42□□□□□ -0.26
EFNB1-201ENST00000204961 SLC22A11Q9NSA0 550 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 GDF2Q9UK05 429 aaPredicted RBP13.42□□□□□ -0.26
EFNB1-201ENST00000204961 SHISA7A6NL88 538 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF217O75362 1048 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 DBHP09172 617 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 RAG2P55895 527 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 UNC119Q13432 240 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 C9orf135Q5VTT2 229 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 GRINAQ7Z429 371 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 CATSPERDQ86XM0 798 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 SPICQ8N5J4 248 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 OR1N1Q8NGS0 311 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 DYRK2Q92630 601 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 GPX7Q96SL4 187 aaPredicted RBP13.42□□□□□ -0.26
EFNB1-201ENST00000204961 NPTNQ9Y639 398 aa13.42□□□□□ -0.26
EFNB1-201ENST00000204961 ALG1L2C9J202 215 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 D6RAR5 112 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 ANGPTL7O43827 346 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 ATG12O94817 140 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 VSIG8P0DPA2 414 aa13.41□□□□□ -0.26
EFNB1-201ENST00000204961 NME1P15531 152 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms