RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LOXL4Q96JB6 756 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 NECAB3Q96P71 396 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 UTP23Q9BRU9 249 aaKnown RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF416Q9BWM5 594 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF436Q9C0F3 470 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 CNTD2Q9H8S5 307 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 GPR84Q9NQS5 396 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 MGAT4CQ9UBM8 478 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 SLC5A6Q9Y289 635 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 MED12Q93074 2177 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 MASP2O00187 686 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 LDLRAD4O15165 306 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 DHHO43323 396 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 HPXP02790 462 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ENPP1P22413 925 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF93P35789 620 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 RAD52P43351 418 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 SLC6A9P48067 706 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 CYB561P49447 251 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 GALK2Q01415 458 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ACER2Q5QJU3 275 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 B3GNTL1Q67FW5 361 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF626Q68DY1 528 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 FAM57BQ71RH2 274 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF767PQ75MW2 155 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 CHMP1BQ7LBR1 199 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 BIVMQ86UB2 503 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF584Q8IVC4 421 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF101Q8IZC7 436 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 GABRG1Q8N1C3 465 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM229BQ8NBD8 167 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 CLEC1AQ8NC01 280 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ACBD4Q8NC06 268 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 OR52N4Q8NGI2 321 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 OR8S1Q8NH09 359 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 NTNG2Q96CW9 530 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 LIN37Q96GY3 246 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 FAM71F1Q96KD3 344 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 SFXN2Q96NB2 322 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF385AQ96PM9 386 aaKnown RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 UCN2Q96RP3 112 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 SEC22CQ9BRL7 303 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 SF3B5Q9BWJ5 86 aaKnown RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 RBM24Q9BX46 236 aaKnown RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZFP64Q9NPA5 681 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 PNRC2Q9NPJ4 139 aaKnown RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 P4HTMQ9NXG6 502 aa7.31□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF107Q9UII5 783 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-201ENST00000054666 COL27A1Q8IZC6 1860 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-201ENST00000054666 A0A0J9YW62 118 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 TSC22D2O75157 780 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 RAB3DO95716 219 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 APOC1P02654 83 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 CD3DP04234 171 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 HCKP08631 526 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 CASRP41180 1078 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 MECP2P51608 486 aaKnown RBP7.3□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF133P52736 654 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-201ENST00000054666 RAC3P60763 192 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 Q5BKY6 102 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 OR10K2Q6IF99 312 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 Q6ZTK2 550 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 TIPARPQ7Z3E1 657 aaKnown RBP7.3□□□□□ -1.24
VAMP3-201ENST00000054666 YRDCQ86U90 279 aaKnown RBP7.3□□□□□ -1.24
VAMP3-201ENST00000054666 NAXDQ8IW45 347 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 CDH26Q8IXH8 852 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM123Q8N131 208 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 BEST3Q8N1M1 668 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 OR51S1Q8NGJ8 323 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 OR2T35Q8NGX2 323 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 EXO5Q9H790 373 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM165Q9HC07 324 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 DLL4Q9NR61 685 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 ABI3Q9P2A4 366 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 MYEF2Q9P2K5 600 aaKnown RBP7.3□□□□□ -1.24
VAMP3-201ENST00000054666 BOKQ9UMX3 212 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-201ENST00000054666 NPTNQ9Y639 398 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 KIAA1549Q9HCM3 1950 aa7.3□□□□□ -1.24
VAMP3-201ENST00000054666 A0A0G2JMM0 328 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 A0A1B0GTI1 187 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 A0A1W2PPB8 328 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 A0A1W2PRS3 328 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM235A6NFC5 223 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 KIR3DP1A8MWS1 328 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 ZNF736B4DX44 427 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-201ENST00000054666 PYCARD-AS1I3L0S3 204 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 FCER2P06734 321 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 POU3F2P20265 443 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-201ENST00000054666 CCL1P22362 96 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 GDF1P27539 372 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 SELENOPP49908 381 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 ZP1P60852 638 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 Q0VFX4 171 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 FAM189A2Q15884 450 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 LAMTOR1Q6IAA8 161 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 FOXL2NBQ6ZUU3 175 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 LYPD6Q86Y78 171 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 SPICQ8N5J4 248 aa7.29□□□□□ -1.24
VAMP3-201ENST00000054666 PNLDC1Q8NA58 520 aaKnown RBP7.29□□□□□ -1.24
VAMP3-201ENST00000054666 CHST4Q8NCG5 386 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms