RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CA10Q9NS85 328 aa15.02■□□□□ -0
PHGDH-229ENST00000641891 EMC3Q9P0I2 261 aa15.02■□□□□ -0
PHGDH-229ENST00000641891 ZNF319Q9P2F9 582 aa15.02■□□□□ -0
PHGDH-229ENST00000641891 A0A1B0GTI1 187 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 G3V3Q6 166 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 STK17BO94768 372 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 PMS2P2O95744 297 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 BDKRB2P30411 391 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 DSCR4P56555 118 aaPredicted RBP15.02□□□□□ -0.01
PHGDH-229ENST00000641891 PSMA6P60900 246 aaKnown RBP15.02□□□□□ -0.01
PHGDH-229ENST00000641891 GABREP78334 506 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 H3F3AP84243 136 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 TAF13Q15543 124 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 ACBD4Q8NC06 268 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 OR51S1Q8NGJ8 323 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 OR13C9Q8NGT0 318 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 SLC39A7Q92504 469 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 SNAPC3Q92966 411 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 SEH1LQ96EE3 360 aa15.02□□□□□ -0.01
PHGDH-229ENST00000641891 ZNF385AQ96PM9 386 aaKnown RBP15.02□□□□□ -0.01
PHGDH-229ENST00000641891 UTP23Q9BRU9 249 aaKnown RBP15.02□□□□□ -0.01
PHGDH-229ENST00000641891 NPDC1Q9NQX5 325 aaPredicted RBP15.02□□□□□ -0.01
PHGDH-229ENST00000641891 TOXO94900 526 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 FAUP35544 74 aaKnown RBP15.01□□□□□ -0.01
PHGDH-229ENST00000641891 HTR2BP41595 481 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 ZNF121P58317 390 aaPredicted RBP15.01□□□□□ -0.01
PHGDH-229ENST00000641891 Q0VFX4 171 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 PMPCAQ10713 525 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 TOMM20Q15388 145 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 B3GNTL1Q67FW5 361 aaPredicted RBP15.01□□□□□ -0.01
PHGDH-229ENST00000641891 HDDC2Q7Z4H3 204 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 PPP1R32Q7Z5V6 425 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 NKAIN3Q8N8D7 197 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 CLEC1AQ8NC01 280 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 OR1M1Q8NGA1 313 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 OR8B12Q8NGG6 310 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 NTNG2Q96CW9 530 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 SORCS2Q96PQ0 1159 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 TAS2R8Q9NYW2 309 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 MGAT4CQ9UBM8 478 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 NPTNQ9Y639 398 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 A0A1B0GVI7 797 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 WDPCPO95876 746 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 AKAIN1P0CW23 69 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 RBMS2Q15434 407 aaKnown RBP15.01□□□□□ -0.01
PHGDH-229ENST00000641891 SGCAQ16586 387 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 CREB3L2Q70SY1 520 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 CDH24Q86UP0 819 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 COMMD2Q86X83 199 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 RHBDD1Q8TEB9 315 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 FAM46BQ96A09 425 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 WDR89Q96FK6 387 aaPredicted RBP15.01□□□□□ -0.01
PHGDH-229ENST00000641891 GPR137Q96N19 417 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 SPACA5Q96QH8 159 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 B3GNT4Q9C0J1 378 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 LOXL2Q9Y4K0 774 aa15.01□□□□□ -0.01
PHGDH-229ENST00000641891 ZDBF2Q9HCK1 2354 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 LOC102725191A0A1B0GVB3 256 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 C5orf63A6NC05 138 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 WIPF3A6NGB9 483 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 TNFSF11O14788 317 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 ABOP16442 354 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 ACP1P24666 158 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 DNASE1P24855 282 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 FKBP2P26885 142 aaKnown RBP15□□□□□ -0.01
PHGDH-229ENST00000641891 ZNF626Q68DY1 528 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 TIPARPQ7Z3E1 657 aaKnown RBP15□□□□□ -0.01
PHGDH-229ENST00000641891 ABHD12BQ7Z5M8 362 aaPredicted RBP15□□□□□ -0.01
PHGDH-229ENST00000641891 GABRG1Q8N1C3 465 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 OR2T35Q8NGX2 323 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 CMBLQ96DG6 245 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 ZNF416Q9BWM5 594 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 GLTPQ9NZD2 209 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 SCP2D1Q9UJQ7 156 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 PCSK5Q92824 1860 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 TMEM235A6NFC5 223 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 B4E171 279 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 ERVH48-1M5A8F1 160 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 TNFRSF10AO00220 468 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 RLN1P04808 185 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 LPLP06858 475 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 TSPAN7P41732 249 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 CX3CR1P49238 355 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 MECP2P51608 486 aaKnown RBP15□□□□□ -0.01
PHGDH-229ENST00000641891 UNC119Q13432 240 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 GFOD2Q3B7J2 385 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 DCAF12Q5T6F0 453 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 STEAP1BQ6NZ63 245 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 PAQR4Q8N4S7 273 aaPredicted RBP15□□□□□ -0.01
PHGDH-229ENST00000641891 ARRDC1-AS1Q9H2J1 176 aa15□□□□□ -0.01
PHGDH-229ENST00000641891 A0A0J9YW62 118 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 E9PLN8 166 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 M0QYG6 137 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 CREBL2O60519 120 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-229ENST00000641891 GP1BAP07359 652 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 TCN2P20062 427 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 ENPP1P22413 925 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 CSNK1A1P48729 337 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 ANGPT1Q15389 498 aa14.99□□□□□ -0.01
PHGDH-229ENST00000641891 KCNMB1Q16558 191 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms