RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SHBQ15464 509 aa14.96□□□□□ -0.01
PHGDH-223ENST00000641597 NKAIN1Q4KMZ8 207 aa14.96□□□□□ -0.01
PHGDH-223ENST00000641597 C12orf45Q8N5I9 185 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-223ENST00000641597 ZNF454Q8N9F8 522 aa14.96□□□□□ -0.01
PHGDH-223ENST00000641597 PLPP5Q8NEB5 264 aa14.96□□□□□ -0.01
PHGDH-223ENST00000641597 POC1BQ8TC44 478 aa14.96□□□□□ -0.01
PHGDH-223ENST00000641597 TMEM234Q8WY98 164 aa14.96□□□□□ -0.01
PHGDH-223ENST00000641597 WDR77Q9BQA1 342 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-223ENST00000641597 MFSD2BA6NFX1 497 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 HLA-AP01891 365 aaKnown RBP14.95□□□□□ -0.02
PHGDH-223ENST00000641597 CELA2AP08217 269 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 CXADRP78310 365 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 C17orf67Q0P5P2 114 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 COL19A1Q14993 1142 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 ZMYND11Q15326 602 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 GUSBP11Q6P575 273 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 TRAPPC6BQ86SZ2 158 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 CADM4Q8NFZ8 388 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 RNF133Q8WVZ7 376 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 PBOV1Q9GZY1 135 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 OR6C65A6NJZ3 312 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 RER1O15258 196 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 NUPL2O15504 423 aaKnown RBP14.95□□□□□ -0.02
PHGDH-223ENST00000641597 VSIG8P0DPA2 414 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 AVPR2P30518 371 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 PRAMEF20Q5VT98 475 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 COMMD2Q86X83 199 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 BOLLQ8N9W6 283 aaKnown RBP14.95□□□□□ -0.02
PHGDH-223ENST00000641597 TMEM229BQ8NBD8 167 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 TMEM104Q8NE00 496 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 MFSD8Q8NHS3 518 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 ST8SIA4Q92187 359 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-223ENST00000641597 SELENOIQ9C0D9 397 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 CST11Q9H112 138 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 SLC17A5Q9NRA2 495 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 PRR13Q9NZ81 148 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 LHFPL6Q9Y693 200 aa14.95□□□□□ -0.02
PHGDH-223ENST00000641597 OR6C76A6NM76 312 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 FAM25EA8MYX2 175 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 E9PLN8 166 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 MASP2O00187 686 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 SYT7O43581 403 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 PCK2Q16822 640 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 ADAD2Q8NCV1 583 aaKnown RBP14.94□□□□□ -0.02
PHGDH-223ENST00000641597 MARVELD3Q96A59 401 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 POTEKPQ9BYX7 375 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 FN3KRPQ9HA64 309 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 CYB5R1Q9UHQ9 305 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 OR14I1A6ND48 311 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 ISG15P05161 165 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 HRH1P35367 487 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 DAP3P51398 398 aaKnown RBP14.94□□□□□ -0.02
PHGDH-223ENST00000641597 PPP1R1AQ13522 171 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 RHBDD2Q6NTF9 364 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 DTX1Q86Y01 620 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 ZNF584Q8IVC4 421 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 CASTOR1Q8WTX7 329 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 ZNF75AQ96N20 296 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 C1orf198Q9H425 327 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 PPP4R1LQ9P1A2 415 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 PLEKHA6Q9Y2H5 1048 aa14.94□□□□□ -0.02
PHGDH-223ENST00000641597 NOP16Q9Y3C1 178 aaKnown RBP14.94□□□□□ -0.02
PHGDH-223ENST00000641597 A0A1W2PQM1 296 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 VSTM2BA6NLU5 285 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 OR2AT4A6NND4 320 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 HMSDA8MTL9 139 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 H3BUI4 141 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 DCNP07585 359 aaKnown RBP14.93□□□□□ -0.02
PHGDH-223ENST00000641597 BDKRB2P30411 391 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 CLDN6P56747 220 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 ZNF260Q3ZCT1 412 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 C1orf100Q5SVJ3 147 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 NAA40Q86UY6 237 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 OR5B2Q96R09 309 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 BANF2Q9H503 90 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 ZNF768Q9H5H4 540 aaKnown RBP14.93□□□□□ -0.02
PHGDH-223ENST00000641597 ASH2LQ9UBL3 628 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 KIF25Q9UIL4 384 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 GPR160Q9UJ42 338 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 RPH3AQ9Y2J0 694 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-223ENST00000641597 POLR1DQ9Y2S0 133 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 KCNK7Q9Y2U2 307 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 LOC390937A0A1W2PQ73 354 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 B8ZZF3 427 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 SCRG1O75711 98 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 CD96P40200 585 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 PTGDSP41222 190 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 AFF3P51826 1226 aaKnown RBP14.93□□□□□ -0.02
PHGDH-223ENST00000641597 ARHGDIBP52566 201 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 BTN1A1Q13410 526 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 TAF13Q15543 124 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 ZNF546Q86UE3 836 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 BEST3Q8N1M1 668 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 OR10H5Q8NGA6 315 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 OR1S1Q8NH92 325 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 ST8SIA1Q92185 356 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 AQP3Q92482 292 aa14.93□□□□□ -0.02
PHGDH-223ENST00000641597 A6NIZ1 184 aa14.92□□□□□ -0.02
PHGDH-223ENST00000641597 PMP2P02689 132 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms