RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 COMMD4Q9H0A8 199 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 DDX28Q9NUL7 540 aaKnown RBP11.27□□□□□ -0.61
PHGDH-218ENST00000641491 B3GNT2Q9NY97 397 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 SLCO1C1Q9NYB5 712 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 MYO7BQ6PIF6 2116 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 CENPEQ02224 2701 aa11.27□□□□□ -0.61
PHGDH-218ENST00000641491 IGHV1-18A0A0C4DH31 117 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ABCD4O14678 606 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 GOSR1O95249 250 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 LCKP06239 509 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ATP6V1B1P15313 513 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 CD40P25942 277 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 C21orf33P30042 268 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-218ENST00000641491 OPRL1P41146 370 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 PSMA6P60900 246 aaKnown RBP11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ROM1Q03395 351 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 CDSNQ15517 529 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 CDONQ4KMG0 1287 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF367Q7RTV3 350 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 EGFL6Q8IUX8 553 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 OR52H1Q8NGJ2 320 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 FGFBP3Q8TAT2 258 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ABHD4Q8TB40 342 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 SPRYD4Q8WW59 207 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-218ENST00000641491 RORBQ92753 470 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 APOBEC3DQ96AK3 386 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-218ENST00000641491 PIK3IP1Q96FE7 263 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 PLPPR2Q96GM1 343 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 MS4A3Q96HJ5 214 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 C4orf45Q96LM5 186 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 RHNO1Q9BSD3 238 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 CDCA4Q9BXL8 241 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 BCL2L14Q9BZR8 327 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 OR51B6Q9H340 312 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 DUSP21Q9H596 190 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ACOXLQ9NUZ1 547 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF224Q9NZL3 707 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 KLHDC2Q9Y2U9 406 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 ATP23Q9Y6H3 246 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 R4GMQ9 66 aa11.26□□□□□ -0.61
PHGDH-218ENST00000641491 WIPF3A6NGB9 483 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 J3QW42 95 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 ATE1O95260 518 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 CELA3BP08861 270 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 CCL2P13500 99 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF14P17017 642 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 CRYGSP22914 178 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 CFL1P23528 166 aaKnown RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 PSMB9P28065 219 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 GCH1P30793 250 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 DCTDP32321 178 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 ETV1P50549 477 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 HIST1H3AP68431 136 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 NAAAQ02083 359 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF85Q03923 595 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 BSPH1Q075Z2 132 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 TBCEQ15813 527 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 HIST2H3PS2Q5TEC6 136 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 SEZ6L2Q6UXD5 910 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 HIST2H3AQ71DI3 136 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 FAM57BQ71RH2 274 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 MRPL21Q7Z2W9 205 aaKnown RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 KLBQ86Z14 1044 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 DMRTC2Q8IXT2 367 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF676Q8N7Q3 588 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 GATAD2BQ8WXI9 593 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 AKAP1Q92667 903 aaKnown RBP eCLIP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 UFD1Q92890 307 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 MRPS26Q9BYN8 205 aaKnown RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 NOX3Q9HBY0 568 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 FKBP14Q9NWM8 211 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 CRNNQ9UBG3 495 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 KCNN3Q9UGI6 736 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 SCOCQ9UIL1 159 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 RNF115Q9Y4L5 304 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 POLQO75417 2590 aa11.25□□□□□ -0.61
PHGDH-218ENST00000641491 INTS1Q8N201 2190 aaKnown RBP11.25□□□□□ -0.61
PHGDH-218ENST00000641491 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 A0A1B0GVI7 797 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 ACOD1A6NK06 481 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 J3QRE1 110 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 XRCC2O43543 280 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 IGLV1-44P01699 117 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 UBCP0CG48 685 aaKnown RBP11.24□□□□□ -0.61
PHGDH-218ENST00000641491 OR12D2P58182 307 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF121P58317 390 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-218ENST00000641491 SNTB2Q13425 540 aaKnown RBP11.24□□□□□ -0.61
PHGDH-218ENST00000641491 SPHARQ15513 63 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 LIPNQ5VXI9 398 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 RNLSQ5VYX0 342 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 VHLLQ6RSH7 139 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 SSX6Q7RTT6 188 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 FTMTQ8N4E7 242 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 RFLNBQ8N5W9 214 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms