RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 RNF167Q9H6Y7 350 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 SIDT1Q9NXL6 827 aaKnown RBP7.55□□□□□ -1.2
NECAP1-227ENST00000640648 CLEC2DQ9UHP7 191 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 B3GALT5Q9Y2C3 310 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 OR1A2Q9Y585 309 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 ANKRD36CQ5JPF3 1778 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 LRP5O75197 1615 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 M0R2Z0 102 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 RRP8O43159 456 aaKnown RBP7.55□□□□□ -1.2
NECAP1-227ENST00000640648 B3GALT4O96024 378 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 NRASP01111 189 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 HRASP01112 189 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 KRASP01116 189 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 AOAHP28039 575 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 CDC34P49427 236 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-227ENST00000640648 P2RX1P51575 399 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF92Q03936 586 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 SOWAHCQ53LP3 525 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-227ENST00000640648 KHDC3LQ587J8 217 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 PRRT3Q5FWE3 981 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF547Q8IVP9 402 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 C12orf76Q8N812 135 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-227ENST00000640648 KCNG3Q8TAE7 436 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 ATP5SQ99766 215 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 TMEM231Q9H6L2 316 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 DMRT3Q9NQL9 472 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 ACER3Q9NUN7 267 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 DOK5Q9P104 306 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 COPS7AQ9UBW8 275 aa7.55□□□□□ -1.2
NECAP1-227ENST00000640648 KLK8O60259 260 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 TNFSF15O95150 251 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MAS1P04201 325 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SCGB1A1P11684 91 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 NTHL1P78549 312 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 ITPRIPL2Q3MIP1 535 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MIDNQ504T8 468 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SPIN3Q5JUX0 258 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OR4C11Q6IEV9 310 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MBOAT2Q6ZWT7 520 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 TRAPPC6BQ86SZ2 158 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 CISD2Q8N5K1 135 aaKnown RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 NHLRC2Q8NBF2 726 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OR51A2Q8NGJ7 313 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OR9A2Q8NGT5 310 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 HOXB13Q92826 284 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SHDQ96IW2 340 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 BMFQ96LC9 184 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 TMEM121BQ9BXQ6 578 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MFRPQ9BY79 579 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SLC26A1Q9H2B4 701 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 RNF122Q9H9V4 155 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SERINC1Q9NRX5 453 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF701Q9NV72 531 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SMCHD1A6NHR9 2005 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 C1orf226A1L170 272 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SCDO00767 359 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 CHRNB4P30926 498 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 ACAA2P42765 397 aaKnown RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SLC6A11P48066 632 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MMP16P51512 607 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SGSHP51688 502 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OC90Q02509 493 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 KLF9Q13886 244 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 IL13RA2Q14627 380 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MSMO1Q15800 293 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 PRSS36Q5K4E3 855 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 CMTM4Q8IZR5 234 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OR52E2Q8NGJ4 325 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MOB3AQ96BX8 217 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SMIM7Q9BQ49 75 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MIEN1Q9BRT3 115 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 C11orf84Q9BUA3 381 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 TMEM191AQ9H0A3 160 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 DNAJC4Q9NNZ3 241 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 PEF1Q9UBV8 284 aaKnown RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 hCG_1809904A0A1W2PP81 198 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 A0A1W2PR64 198 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 A0A1W2PRV1 198 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 PLPP2O43688 288 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 HMGN2P05204 90 aaKnown RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 ITGA5P08648 1049 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 BTF3P20290 206 aaKnown RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 HSD11B1P28845 292 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 BCL6P41182 706 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SLC14A1Q13336 389 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 JOSD1Q15040 202 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 MEP1BQ16820 701 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 BRICD5Q6PL45 260 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 LANCL3Q6ZV70 420 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 CBARPQ8N350 705 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-227ENST00000640648 NINQ8N4C6 2090 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OR5D14Q8NGL3 314 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 OR2T10Q8NGZ9 312 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 NUBPLQ8TB37 319 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF480Q8WV37 535 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 SMIM19Q96E16 107 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 RSRP1Q9BUV0 290 aa7.54□□□□□ -1.2
NECAP1-227ENST00000640648 FAM206AQ9NX38 181 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms