RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CCDC36Q8IYA8 594 aa17.97■□□□□ 0.47
SYNGAP1-227ENST00000638142 LMX1AQ8TE12 382 aa17.97■□□□□ 0.47
SYNGAP1-227ENST00000638142 NKD1Q969G9 470 aa17.97■□□□□ 0.47
SYNGAP1-227ENST00000638142 SEC22AQ96IW7 307 aa17.97■□□□□ 0.47
SYNGAP1-227ENST00000638142 CNTD2Q9H8S5 307 aa17.97■□□□□ 0.47
SYNGAP1-227ENST00000638142 PLEKHA6Q9Y2H5 1048 aa17.97■□□□□ 0.47
SYNGAP1-227ENST00000638142 WIPF3A6NGB9 483 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 P2RY10O00398 339 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 LMX1BO60663 402 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 MTRF1O75570 445 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 SCGNO76038 276 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 NME1P15531 152 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 DAP3P51398 398 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 ATP1B3P54709 279 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 PAN3Q58A45 887 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 ELP2Q6IA86 826 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 UQCC3Q6UW78 93 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 OR2W3Q7Z3T1 314 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 LINC00346Q8IVM7 164 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 ZNF441Q8N8Z8 693 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 MRGPRFQ96AM1 343 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 ZNF75AQ96N20 296 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 RAB33BQ9H082 229 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 HPF1Q9NWY4 346 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 DHCR7Q9UBM7 475 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 OR6C76A6NM76 312 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 NPIPA5E9PKD4 350 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 SIGLEC6O43699 453 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 STK17BO94768 372 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 BPNT1O95861 308 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 H2BFMP0C1H6 154 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 H2AFB1P0C5Y9 115 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 LIPCP11150 499 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 PRKXP51817 358 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 IL13RA1P78552 427 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 SNTB1Q13884 538 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 SHHQ15465 462 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 THAP6Q8TBB0 222 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 TMEM234Q8WY98 164 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 PIGMQ9H3S5 423 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 GAREM1Q9H706 876 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 NPIPA1Q9UND3 350 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 KCNK7Q9Y2U2 307 aa17.96■□□□□ 0.47
SYNGAP1-227ENST00000638142 NPIPB13A6NJU9 1138 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 NPIPB4C9JG80 1138 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 DCNP07585 359 aaKnown RBP17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 FMODQ06828 376 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 MYO9BQ13459 2157 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 C17orf82Q86X59 251 aaPredicted RBP17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 KDM8Q8N371 416 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 PAQR4Q8N4S7 273 aaPredicted RBP17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 RNF133Q8WVZ7 376 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 KCNK17Q96T54 332 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 UQCC2Q9BRT2 126 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 MS4A18H0YCH9 400 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 SIGLEC5O15389 551 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 TBPP20226 339 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 CASRP41180 1078 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 PPIAP62937 165 aaKnown RBP17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 SIGLEC14Q08ET2 396 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 UNC119Q13432 240 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 MS4A18Q3C1V0 323 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 SLC22A24Q8N4F4 322 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 DTWD2Q8NBA8 298 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 CHST4Q8NCG5 386 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 FGGYQ96C11 551 aa17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 NUDT16L1Q9BRJ7 211 aaKnown RBP17.95■□□□□ 0.46
SYNGAP1-227ENST00000638142 PCNX3Q9H6A9 2034 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 SULT2B1O00204 365 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 IL11P20809 199 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 GSK3AP49840 483 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 QRFPP83859 136 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 ATXN7L3Q14CW9 347 aaPredicted RBP17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 SHEQ5VZ18 495 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 MISPQ8IVT2 679 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 INO80EQ8NBZ0 244 aaPredicted RBP17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 LOC101059948A0A1B0GTJ6 334 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 FBLP22087 321 aaKnown RBP17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 BEX5Q5H9J7 111 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 GVQW1Q8N7I0 195 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 TMEM185AQ8NFB2 350 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 RELTQ969Z4 430 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 CMBLQ96DG6 245 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 CENPMQ9NSP4 180 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 FAM206AQ9NX38 181 aa17.94■□□□□ 0.46
SYNGAP1-227ENST00000638142 LOC100509620A0A075B734 347 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR52W1Q6IF63 320 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 H1FNTQ75WM6 255 aaPredicted RBP17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR1M1Q8NGA1 313 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 MFSD8Q8NHS3 518 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 NUDCD2Q8WVJ2 157 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 ZNF304Q9HCX3 659 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 MKL2Q9ULH7 1088 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 RAB19A4D1S5 217 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 FAM25EA8MYX2 175 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 ADAM10O14672 748 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 ATG12O94817 140 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 DUS4LO95620 317 aaKnown RBP17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 GLULP15104 373 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms