RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 OR52H1Q8NGJ2 320 aa13.81□□□□□ -0.2
CLN8-209ENST00000635970 OR5AK2Q8NH90 309 aa13.81□□□□□ -0.2
CLN8-209ENST00000635970 GINS4Q9BRT9 223 aa13.81□□□□□ -0.2
CLN8-209ENST00000635970 IFT46Q9NQC8 304 aa13.81□□□□□ -0.2
CLN8-209ENST00000635970 DNAJB12Q9NXW2 375 aaKnown RBP13.81□□□□□ -0.2
CLN8-209ENST00000635970 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
CLN8-209ENST00000635970 A0A0G2JMM0 328 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 A0A1W2PPB8 328 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 A0A1W2PRS3 328 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 KIR3DP1A8MWS1 328 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 MAGEB4O15481 346 aaPredicted RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 SP1P08047 785 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 NGFRP08138 427 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 UBBP0CG47 229 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 UBCP0CG48 685 aaKnown RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 AKAIN1P0CW23 69 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 CD46P15529 392 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 RPL4P36578 427 aaKnown RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 RPS27AP62979 156 aaKnown RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 UBA52P62987 128 aaKnown RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 PLAURQ03405 335 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 ALKBH1Q13686 389 aaKnown RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 ZNHIT3Q15649 155 aaPredicted RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 SFRP5Q5T4F7 317 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 CCDC107Q8WV48 283 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 GCDHQ92947 438 aaPredicted RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 C5orf34Q96MH7 638 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 TTTY10Q9BZA0 68 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 DEPPQ9NTK1 212 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 STEAP1Q9UHE8 339 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 SLC6A5Q9Y345 797 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 CHCHD2Q9Y6H1 151 aaPredicted RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 NPIPA5A0A0B4J1W7 369 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 A0A0D9SG52 128 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 RFPL4AA6NLU0 287 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 MCIDASD6RGH6 385 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 NPIPA7E9PJI5 369 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 RFPL4AL1F8VTS6 287 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 TO15178 435 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 NME2P1O60361 137 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 SELENOFO60613 162 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 NPIPA8P0DM63 369 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 VSIG10L2P0DP72 767 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 MGMTP16455 207 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 NME2P22392 152 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 H2BFSP57053 126 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 LTBQ06643 244 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 PCGF3Q3KNV8 242 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 PRAMEF20Q5VT98 475 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 ZNF660Q6AZW8 331 aaPredicted RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 ANKRD16Q6P6B7 361 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 PM20D2Q8IYS1 436 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 RGP1Q92546 391 aaPredicted RBP13.8□□□□□ -0.2
CLN8-209ENST00000635970 HRH3Q9Y5N1 445 aa13.8□□□□□ -0.2
CLN8-209ENST00000635970 RELNP78509 3460 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 NCKAP5O14513 1909 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 A0A087WUJ7 227 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 MPTX1A8MV57 137 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 ABCD4O14678 606 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 IMPA2O14732 288 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 MPGP29372 298 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 NANOS3P60323 173 aaKnown RBP13.79□□□□□ -0.2
CLN8-209ENST00000635970 ZNF141Q15928 474 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 CLVS2Q5SYC1 327 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 NHLRC1Q6VVB1 395 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 LRRTM1Q86UE6 522 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 OR51L1Q8NGJ5 315 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 TAAR6Q96RI8 345 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 ADOQ96SZ5 270 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 NMNAT3Q96T66 252 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 MFFQ9GZY8 342 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 C1orf198Q9H425 327 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 Q9N2J8 555 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 SH2D2AQ9NP31 389 aa13.79□□□□□ -0.2
CLN8-209ENST00000635970 MYOZ1Q9NP98 299 aaPredicted RBP13.79□□□□□ -0.2
CLN8-209ENST00000635970 FXYD6-FXYD2A0A087WZ82 144 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 OR6C68A6NDL8 312 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 TTLL8A6PVC2 850 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 SULT1C2O00338 296 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 MTRF1O75570 445 aaKnown RBP13.78□□□□□ -0.2
CLN8-209ENST00000635970 PMS2P2O95744 297 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 ANXA2P07355 339 aaKnown RBP13.78□□□□□ -0.2
CLN8-209ENST00000635970 POU3F2P20265 443 aaPredicted RBP13.78□□□□□ -0.2
CLN8-209ENST00000635970 RFC3P40938 356 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 CLDN12P56749 244 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 RPS4XP62701 263 aaKnown RBP13.78□□□□□ -0.2
CLN8-209ENST00000635970 LINC01590Q5TEZ4 76 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 CFAP77Q6ZQR2 320 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
CLN8-209ENST00000635970 TMEM17Q86X19 198 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 SULF2Q8IWU5 870 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 CISD2Q8N5K1 135 aaKnown RBP13.78□□□□□ -0.2
CLN8-209ENST00000635970 BCORP1Q8N888 145 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 TMEM178AQ8NBL3 297 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 PXT1Q8NFP0 134 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 OR4C16Q8NGL9 310 aa13.78□□□□□ -0.2
CLN8-209ENST00000635970 OR6K6Q8NGW6 343 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms