RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 VRK1Q99986 396 aaPredicted RBP13.29□□□□□ -0.28
CLN6-211ENST00000635754 YIPF3Q9GZM5 350 aa13.29□□□□□ -0.28
CLN6-211ENST00000635754 SLCO1C1Q9NYB5 712 aa13.29□□□□□ -0.28
CLN6-211ENST00000635754 E9PQ18 207 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 CASQ2O14958 399 aaPredicted RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 CLPTM1O96005 669 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 IGHV4-39P01824 125 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 ERCC1P07992 297 aaPredicted RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 HSD11B1P28845 292 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 SLC6A9P48067 706 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 GRB2P62993 217 aaKnown RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 MOGQ16653 247 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 NKPD1Q17RQ9 610 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 RSPO1Q2MKA7 263 aaPredicted RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 OGFRL1Q5TC84 451 aaPredicted RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 MBNL2Q5VZF2 373 aaKnown RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 DRAM2Q6UX65 266 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 SPATC1Q76KD6 591 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 RHOUQ7L0Q8 258 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 THEM6Q8WUY1 208 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 SNX33Q8WV41 574 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 RNF133Q8WVZ7 376 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 MS4A5Q9H3V2 200 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 FAM118AQ9NWS6 357 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 DNAJC27Q9NZQ0 273 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 MYEF2Q9P2K5 600 aaKnown RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
CLN6-211ENST00000635754 LAMP5Q9UJQ1 280 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 STARD10Q9Y365 291 aa13.28□□□□□ -0.28
CLN6-211ENST00000635754 LOC100130705A0A1B0GUX0 176 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 NDUFS7O75251 213 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 IGHV3-13P01766 116 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 ADRA2AP08913 450 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
CLN6-211ENST00000635754 MPV17P39210 176 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 ALDH3B1P43353 468 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 SLC34A1Q06495 639 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 POU4F2Q12837 409 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 MAD2L1BPQ15013 274 aaPredicted RBP13.27□□□□□ -0.29
CLN6-211ENST00000635754 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 ZNF582Q96NG8 517 aaPredicted RBP13.27□□□□□ -0.29
CLN6-211ENST00000635754 SORCS2Q96PQ0 1159 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 AMELYQ99218 206 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 C1QTNF5Q9BXJ0 243 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 RAB1BQ9H0U4 201 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 VCXQ9H320 206 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 HAO2Q9NYQ3 351 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 TAAR3PQ9P1P4 343 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 TMEM14AQ9Y6G1 99 aa13.27□□□□□ -0.29
CLN6-211ENST00000635754 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 SLC16A6O15403 523 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 MPZL2O60487 215 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 APOC1P02654 83 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 MT-ND5P03915 603 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 LCATP04180 440 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 H2BFMP0C1H6 154 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 HTR1FP30939 366 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 OPRL1P41146 370 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 PRKXP51817 358 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 SNRPGP62308 76 aaKnown RBP13.26□□□□□ -0.29
CLN6-211ENST00000635754 TMED1Q13445 227 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 SLC25A30Q5SVS4 291 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 MEDAGQ5VYS4 303 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 KCTD18Q6PI47 426 aaPredicted RBP13.26□□□□□ -0.29
CLN6-211ENST00000635754 SPNS3Q6ZMD2 512 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 COLCA1Q6ZS62 124 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.26□□□□□ -0.29
CLN6-211ENST00000635754 KRTAP1-3Q8IUG1 177 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 ZNF283Q8N7M2 679 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 OR51G2Q8NGK0 314 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 UBE2FQ969M7 185 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 MNTQ99583 582 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 POFUT1Q9H488 388 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 RNPEPL1Q9HAU8 725 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 ADGRL4Q9HBW9 690 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 PTTG3PQ9NZH4 202 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 NKX1-2Q9UD57 310 aaPredicted RBP13.26□□□□□ -0.29
CLN6-211ENST00000635754 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLN6-211ENST00000635754 KLHDC2Q9Y2U9 406 aa13.26□□□□□ -0.29
CLN6-211ENST00000635754 PLSCR5A0PG75 271 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 SNTNA6NMZ2 147 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 DLGAP1O14490 977 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 ALOX5APP20292 161 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 EFNA4P52798 201 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 HCCSP53701 268 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 MALLQ13021 153 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 OCLNQ16625 522 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 ALKBH6Q3KRA9 238 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 KRT77Q7Z794 578 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 NAA40Q86UY6 237 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 SLC35F2Q8IXU6 374 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 ENTHD1Q8IYW4 607 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 ZCCHC24Q8N2G6 241 aaKnown RBP13.25□□□□□ -0.29
CLN6-211ENST00000635754 ASB17Q8WXJ9 295 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 APOL4Q9BPW4 351 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 TPK1Q9H3S4 243 aa13.25□□□□□ -0.29
CLN6-211ENST00000635754 CGGBP1Q9UFW8 167 aaPredicted RBP13.25□□□□□ -0.29
CLN6-211ENST00000635754 PHYHO14832 338 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 TIMM8AO60220 97 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms