RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 RER1O15258 196 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 DNPH1O43598 174 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 PEX14O75381 377 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 LSM6P62312 80 aaKnown RBP17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 FAPQ12884 760 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 TAF13Q15543 124 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 ZNF813Q6ZN06 617 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 OR6N1Q8NGY5 312 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 ATG5Q9H1Y0 275 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 TMEM9BQ9NQ34 198 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 RHBDD3Q9Y3P4 386 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 KIAA1549Q9HCM3 1950 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 A0A1B0GTI1 187 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 A0A1W2PNU3 283 aaPredicted RBP17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 ALDOBP05062 364 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 GABRA1P14867 456 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 ADGRE4PQ86SQ3 457 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 TMEM123Q8N131 208 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 OR1J2Q8NGS2 313 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 ADAT3Q96EY9 351 aaPredicted RBP17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 SORCS2Q96PQ0 1159 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 SLA2Q9H6Q3 261 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 TAS2R8Q9NYW2 309 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 EMC3Q9P0I2 261 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 FOXJ2Q9P0K8 574 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 BOLA1Q9Y3E2 137 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 BDKRB2P30411 391 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 GUCA1AP43080 201 aaPredicted RBP17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 PRKXP51817 358 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 CAPZA1P52907 286 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 RAC3P60763 192 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 SPEM2Q0P670 501 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 PHYHD1Q5SRE7 291 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 FOXL2NBQ6ZUU3 175 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 BEST3Q8N1M1 668 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 OR11H7Q8NGC8 314 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 OR51E1Q8TCB6 317 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 KCNE4Q8WWG9 221 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 PSMF1Q92530 271 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 PTX4Q96A99 478 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 ZNF416Q9BWM5 594 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 SRXN1Q9BYN0 137 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 PLSCR3Q9NRY6 295 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 NKIRAS2Q9NYR9 191 aa17.43■□□□□ 0.38
PCDHB11-202ENST00000624887 A0A1B0GVI7 797 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 LRRC3CA6NJW4 275 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 MSR1P21757 451 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 ENPP1P22413 925 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 PRSS3P35030 304 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 GNALP38405 381 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 CYB561P49447 251 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 ZNF121P58317 390 aaPredicted RBP17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 TNK1Q13470 666 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 SGCAQ16586 387 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 ST3GAL2Q16842 350 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 PCGF3Q3KNV8 242 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 ZNF529Q6P280 563 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 FGD2Q7Z6J4 655 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 YRDCQ86U90 279 aaKnown RBP17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 ZIC4Q8N9L1 334 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 OR14L1PQ8NHC6 308 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 SF3B5Q9BWJ5 86 aaKnown RBP17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 NELFAQ9H3P2 528 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 TMEM138Q9NPI0 162 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 FLVCR2Q9UPI3 526 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 TNFRSF10AO00220 468 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 PRAF2O60831 178 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 ALX3O95076 343 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 WDPCPO95876 746 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 CSF1P09603 554 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 SDHBP21912 280 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 SUCLG1P53597 346 aaKnown RBP17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 GRB2P62993 217 aaKnown RBP17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 TMEM164Q5U3C3 297 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 FAAP20Q6NZ36 180 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 OR1M1Q8NGA1 313 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 OR8B12Q8NGG6 310 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 OR4D6Q8NGJ1 314 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 OR5D14Q8NGL3 314 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 ZFAND1Q8TCF1 268 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 INTS12Q96CB8 462 aaKnown RBP17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 TMEM246Q9BRR3 403 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 STMN3Q9NZ72 180 aa17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 FOXD3Q9UJU5 478 aaPredicted RBP17.42■□□□□ 0.38
PCDHB11-202ENST00000624887 NCKAP5O14513 1909 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 CCDC187A0A096LP49 1063 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 A0A0A6YYH2 397 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 A6NJ64 397 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 RFPL3SP0C7P2 107 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 CTSSP25774 331 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 FAUP35544 74 aaKnown RBP17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 SSBP1Q04837 148 aaKnown RBP17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 PNPLA2Q96AD5 504 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 CDC6Q99741 560 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 GPR87Q9BY21 358 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 OR10A4Q9H209 315 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 CNTD2Q9H8S5 307 aa17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 MRPS18CQ9Y3D5 142 aaKnown RBP17.41■□□□□ 0.38
PCDHB11-202ENST00000624887 C21orf140B9A014 251 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 SULT1C2O00338 296 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms