RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 FGF17O60258 216 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 KIAA0513O60268 411 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 GPRIN2O60269 458 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 GPR137BO60478 399 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CTSVO60911 334 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CDC123O75794 336 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 TNFSF15O95150 251 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SNX4O95219 450 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 IGF2P01344 180 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 APOC1P02654 83 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CD2P06729 351 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 LIPFP07098 398 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ANKRD34CP0C6C1 535 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 OR2T7P0C7T2 308 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CCL4P13236 92 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 FOLR1P15328 257 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 FUT1P19526 365 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 TBXA2RP21731 343 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 AHCYP23526 432 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 MMP11P24347 488 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CRABP1P29762 137 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 FAUP35544 74 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 EIF1P41567 113 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 SLC1A3P43003 542 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 MAP2K4P45985 399 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 DAP3P51398 398 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 POLR2HP52434 150 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 EMP2P54851 167 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SLC26A5P58743 744 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 VBP1P61758 197 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 RPS15P62841 145 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 CDK5Q00535 292 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 RASGEF1BQ0VAM2 473 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 EIF3IQ13347 325 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 EXOSC7Q15024 291 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 TAF13Q15543 124 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ZNF141Q15928 474 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 EXT1Q16394 746 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 DUSP5Q16690 384 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CTU2Q2VPK5 515 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 PGGHGQ32M88 737 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 NDUFAF6Q330K2 333 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CCDC58Q4VC31 144 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 TRMT12Q53H54 448 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 PYDC2Q56P42 97 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 DCAF12Q5T6F0 453 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 HACD4Q5VWC8 232 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 C12orf73Q69YU5 71 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 XKRXQ6PP77 449 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 OPN5Q6U736 354 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 METAP1DQ6UB28 335 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 FAM131AQ6UXB0 335 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 LRRN1Q6UXK5 716 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ZNF836Q6ZNA1 936 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 FRRS1Q6ZNA5 592 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 RBPMS2Q6ZRY4 209 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 TMPRSS11FQ6ZWK6 438 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 DGLUCYQ7Z3D6 616 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 TMEM179BQ7Z7N9 219 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ZNF554Q86TJ5 538 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 MUC20Q8N307 709 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 CIARTQ8N365 385 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 GDPD1Q8N9F7 314 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 C17orf47Q8NEP4 570 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 Q8NFD4 153 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 OR6K6Q8NGW6 343 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 OR2T27Q8NH04 317 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 OR51A7Q8NH64 312 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ZNF671Q8TAW3 534 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SETD6Q8TBK2 473 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ENKURQ8TC29 256 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SECTM1Q8WVN6 248 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 MR1Q95460 341 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 PNPLA2Q96AD5 504 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 TMIGD2Q96BF3 282 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SPACA9Q96E40 222 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 CPNE2Q96FN4 548 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 SENP5Q96HI0 755 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 DIRAS2Q96HU8 199 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 MS4A10Q96PG2 267 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 RBP7Q96R05 134 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 CNN2Q99439 309 aaKnown RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 NAA11Q9BSU3 229 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 ABHD6Q9BV23 337 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ZNF717Q9BY31 904 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 DEFB126Q9BYW3 111 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 ULBP3Q9BZM4 244 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 LAT2Q9GZY6 243 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SLC22A4Q9H015 551 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 OR51V1Q9H2C8 321 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SLC38A1Q9H2H9 487 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 OR52D1Q9H346 318 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 DSN1Q9H410 356 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 RERGLQ9H628 205 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 METTL7AQ9H8H3 244 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 SP140LQ9H930 580 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 FAM60AQ9NP50 221 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 FGF20Q9NP95 211 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 LHX9Q9NQ69 397 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 TIGARQ9NQ88 270 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms