RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 NLRC3Q7RTR2 1065 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 ADGRG3Q86Y34 549 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 CLEC1AQ8NC01 280 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 VRK1Q99986 396 aaPredicted RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 BOKQ9UMX3 212 aaPredicted RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 KLHDC2Q9Y2U9 406 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 TMEM184BQ9Y519 407 aaPredicted RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 LOC102725191A0A1B0GVB3 256 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 HSPB6O14558 160 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 GIPP09681 153 aaPredicted RBP11.9□□□□□ -0.5
SIRPA-204ENST00000622179 CXCL3P19876 107 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 CYB561P49447 251 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 ZNF121P58317 390 aaPredicted RBP11.9□□□□□ -0.5
SIRPA-204ENST00000622179 FNDC9Q8TBE3 224 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 PAQR8Q8TEZ7 354 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 CMBLQ96DG6 245 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 OXGR1Q96P68 337 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 SDHCQ99643 169 aaPredicted RBP11.9□□□□□ -0.5
SIRPA-204ENST00000622179 SYT3Q9BQG1 590 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 TINAGL1Q9GZM7 467 aaPredicted RBP11.9□□□□□ -0.5
SIRPA-204ENST00000622179 EMC3Q9P0I2 261 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 PDGFAP04085 211 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 GLI4P10075 376 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 HLA-DOBP13765 273 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 GRB2P62993 217 aaKnown RBP11.9□□□□□ -0.5
SIRPA-204ENST00000622179 GSG1Q2KHT4 349 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 CD200R1LQ6Q8B3 271 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 LIX1LQ8IVB5 337 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 TAS2R5Q9NYW4 299 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
SIRPA-204ENST00000622179 MED12Q93074 2177 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 TCRBV16S1A1N1A0A5B0 115 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 RER1O15258 196 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 RHBDD2Q6NTF9 364 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 TMUB2Q71RG4 321 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 D2HGDHQ8N465 521 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 ZCCHC4Q9H5U6 513 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 GPR173Q9NS66 373 aa11.9□□□□□ -0.5
SIRPA-204ENST00000622179 NOTCH4Q99466 2003 aa11.9□□□□□ -0.51
SIRPA-204ENST00000622179 BORCS7-ASMTA0A0B4J1R7 106 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 A0A0B4J2A0 478 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 ADH6P28332 368 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 ATP1B3P54709 279 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 EXOSC2Q13868 293 aaKnown RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 PPA1Q15181 289 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 TEX19Q8NA77 164 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 OR2AK2Q8NG84 335 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 SHPKQ9UHJ6 478 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CEP250Q9BV73 2442 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 HSPB2A8KAH6 182 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 SGCEO43556 437 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 SNRPNP63162 240 aaKnown RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 HSPB2Q16082 182 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 OR52W1Q6IF63 320 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 HAGHLQ6PII5 290 aaPredicted RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 DOK3Q7L591 496 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 ZNF721Q8TF20 911 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 B3GNT2Q9NY97 397 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 ANAPC1Q9H1A4 1944 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 OR4C45A6NMZ5 311 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 S100A9P06702 114 aaKnown RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CHRM2P08172 466 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 OR4E1P0C645 316 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 RPS4Y1P22090 263 aaKnown RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CPT2P23786 658 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 HRH1P35367 487 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 LUMP51884 338 aaPredicted RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 ARG2P78540 354 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 MRPL49Q13405 166 aaKnown RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CDC20BQ86Y33 519 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 ZNF687Q8N1G0 1237 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 SCPEP1Q9HB40 452 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CNOT1A5YKK6 2376 aaKnown RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 FAM166BA8MTA8 275 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 TNFSF11O14788 317 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CXCL13O43927 109 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CTAG2O75638 210 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 TMIGD3P0DMS9 266 aaPredicted RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CAV2P51636 162 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
SIRPA-204ENST00000622179 PCBD1P61457 104 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 ZMIZ1Q9ULJ6 1067 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 SPTBN2O15020 2390 aa11.89□□□□□ -0.51
SIRPA-204ENST00000622179 M0R135 149 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 FADS1O60427 444 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 FBXO24O75426 580 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 TAS2R46P59540 309 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 CD300LFQ8TDQ1 290 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 ZNF799Q96GE5 643 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 THOC3Q96J01 351 aaKnown RBP11.88□□□□□ -0.51
SIRPA-204ENST00000622179 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
SIRPA-204ENST00000622179 SMOC1Q9H4F8 434 aa11.88□□□□□ -0.51
SIRPA-204ENST00000622179 FBXO4Q9UKT5 387 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms