RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ZNF17P17021 662 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 MDKP21741 143 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 OR1E1P30953 314 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 NBL1P41271 181 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 CSNK1A1P48729 337 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 IDH2P48735 452 aaKnown RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 EMDP50402 254 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 UGT2B15P54855 530 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 CLDN6P56747 220 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 OR2B8PP59922 312 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SPCS3P61009 180 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 UBE2MP61081 183 aaKnown RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 VLDLRP98155 873 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ST3GAL3Q11203 375 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ATP6V1FQ16864 119 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF658BQ4V348 819 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SOHLH1Q5JUK2 328 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SDHAF4Q5VUM1 108 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 METTL21CQ5VZV1 264 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 DNM1P34Q6PK57 102 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ATRAIDQ6UW56 229 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 CYS1Q717R9 158 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 AHSA2Q719I0 299 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 COX15Q7KZN9 410 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 HSD11B1LQ7Z5J1 315 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 C2orf73Q8N5S3 287 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 TMEM251Q8N6I4 163 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 C14orf178Q8N769 122 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 TPRX1Q8N7U7 411 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 OR4D9Q8NGE8 314 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 OR2D3Q8NGH3 330 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 OR5L2Q8NGL0 311 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 LYPD6BQ8NI32 183 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 RFESDQ8TAC1 157 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ADAMTS16Q8TE57 1224 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 RNF138Q8WVD3 245 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 DYDC1Q8WWB3 177 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 BAALCQ8WXS3 180 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 AP3S1Q92572 193 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 STMN2Q93045 179 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 CMTM5Q96DZ9 223 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SGTBQ96EQ0 304 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 WDR34Q96EX3 536 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 CCDC42Q96M95 316 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 NOL4LQ96MY1 436 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF75AQ96N20 296 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 WFIKKN1Q96NZ8 548 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 MICU1Q9BPX6 476 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 APOOQ9BUR5 198 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 BCL2L14Q9BZR8 327 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 NMUR2Q9GZQ4 415 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SLC22A4Q9H015 551 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ARMC7Q9H6L4 198 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 NHEJ1Q9H9Q4 299 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SLC2A6Q9UGQ3 507 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ERVW-1Q9UQF0 538 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 EXOSC1Q9Y3B2 195 aaKnown RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 MMACHCQ9Y4U1 282 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 GMPPBQ9Y5P6 360 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 PBRM1Q86U86 1689 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 KIAA0232Q92628 1395 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 UBN2Q6ZU65 1347 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 NPIPA5A0A0B4J1W7 369 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 GNG14A0A1W2PPG7 69 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 HIDE1A8MVS5 230 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 NPIPA5E9PKD4 350 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 H3BNH8 94 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 hCG_2039718K7EN88 272 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 PPP1R2P9O14990 202 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 MAGEB4O15481 346 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 TYROBPO43914 113 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 SERF1AO75920 110 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 C1orf105O95561 183 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 IGSF6O95976 241 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 IGLV1-47P01700 117 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 IGKV3-11P04433 115 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 RHOCP08134 193 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 GNAO1P09471 354 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 CCNE1P24864 410 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 LOXP28300 417 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ARR3P36575 388 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 RPL4P36578 427 aaKnown RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 TGFBR2P37173 567 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 CD79BP40259 229 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 RAG2P55895 527 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 UBE2KP61086 200 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 LSM6P62312 80 aaKnown RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 RGS1Q08116 209 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 RAB40BQ12829 278 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 PSG7Q13046 419 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 MAD2L1BPQ15013 274 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 POU2AF1Q16633 256 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 NDUFA9Q16795 377 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 DGUOKQ16854 277 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 CHRFAM7AQ494W8 412 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 GCSAMLQ5JQS6 135 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 PPM1LQ5SGD2 360 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ANKRD26P1Q6NSI1 321 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 C3orf33Q6P1S2 294 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms