RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 C15orf40Q8WUR7 153 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 SLC25A28Q96A46 364 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 ZNF837Q96EG3 531 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-206ENST00000619300 N6AMT1Q9Y5N5 214 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 PHF3Q92576 2039 aaKnown RBP16.79■□□□□ 0.28
PSPC1-206ENST00000619300 LOC100289279A0A1B0GTE1 492 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 A0A1B0GVI7 797 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 KLRC4-KLRK1H3BQV0 150 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 EIF2B2P49770 351 aaKnown RBP16.79■□□□□ 0.28
PSPC1-206ENST00000619300 RRADP55042 308 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 SOX8P57073 446 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 SPOCK1Q08629 439 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 GLYATL3Q5SZD4 288 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 FAM27BQ5VT28 67 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 MTFR2Q6P444 385 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 SIAH3Q8IW03 269 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 MARVELD1Q9BSK0 173 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 PAIP2BQ9ULR5 123 aaKnown RBP16.79■□□□□ 0.28
PSPC1-206ENST00000619300 DCDC2BA2VCK2 349 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 CENPXA8MT69 81 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 GABARAPH6UMI1 98 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 TNFRSF10AO00220 468 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 GLSO94925 669 aaPredicted RBP16.78■□□□□ 0.28
PSPC1-206ENST00000619300 SLC2A1P11166 492 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 HTR2CP28335 458 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 DDOSTP39656 456 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 GALK2Q01415 458 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 ANKRD16Q6P6B7 361 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 ZNF283Q8N7M2 679 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 OR8B12Q8NGG6 310 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 PLEKHA1Q9HB21 404 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 SLC5A6Q9Y289 635 aa16.78■□□□□ 0.28
PSPC1-206ENST00000619300 XRCC3O43542 346 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 ORC5O43913 435 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 ATP6V1G1O75348 118 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 TMIGD3P0DMS9 266 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-206ENST00000619300 CD46P15529 392 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 GDNFP39905 211 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 MEOX1P50221 254 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 CLDN18P56856 261 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 MRPS10P82664 201 aaKnown RBP16.77■□□□□ 0.28
PSPC1-206ENST00000619300 HYAL4Q2M3T9 481 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 PLA1AQ53H76 456 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 NKAIN3Q8N8D7 197 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 OR6M1Q8NGM8 313 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 OR1J2Q8NGS2 313 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 FCAMRQ8WWV6 532 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 ADAT3Q96EY9 351 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-206ENST00000619300 AUNIPQ9H7T9 357 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 CRLF2Q9HC73 371 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 SLC17A5Q9NRA2 495 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 ZNF319Q9P2F9 582 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 CGGBP1Q9UFW8 167 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-206ENST00000619300 ITGB1BP2Q9UKP3 347 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 MED13Q9UHV7 2174 aa16.77■□□□□ 0.28
PSPC1-206ENST00000619300 A0A0B4J293 547 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 GNALP38405 381 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 EFNB2P52799 333 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 TAS2R20P59543 309 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 SRYQ05066 204 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 CCDC92Q53HC0 331 aaPredicted RBP16.77■□□□□ 0.27
PSPC1-206ENST00000619300 C1orf100Q5SVJ3 147 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 FAM57BQ71RH2 274 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 VASH2Q86V25 355 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 GPR137CQ8N3F9 429 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 OR5D14Q8NGL3 314 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 OR52I2Q8NH67 350 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 CPT1CQ8TCG5 803 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 ABHD3Q8WU67 409 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 CREB3L1Q96BA8 519 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 UPRTQ96BW1 309 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 FOXRED1Q96CU9 486 aaPredicted RBP16.77■□□□□ 0.27
PSPC1-206ENST00000619300 NKX3-1Q99801 234 aaPredicted RBP16.77■□□□□ 0.27
PSPC1-206ENST00000619300 SLC6A15Q9H2J7 730 aa16.77■□□□□ 0.27
PSPC1-206ENST00000619300 KIAA1549Q9HCM3 1950 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 LOC390937A0A1W2PQ73 354 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 CTAG2O75638 210 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 CCNKO75909 580 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 LIPCP11150 499 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 ZNF708P17019 499 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 BTCP35070 178 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 DYRK1AQ13627 763 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 KLF9Q13886 244 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-206ENST00000619300 ELFN2Q5R3F8 820 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 ZNF813Q6ZN06 617 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 LYPD6Q86Y78 171 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 JAGN1Q8N5M9 183 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 HAS2Q92819 552 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 FBXO17Q96EF6 278 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 C7orf50Q9BRJ6 194 aaKnown RBP16.76■□□□□ 0.27
PSPC1-206ENST00000619300 DIABLOQ9NR28 239 aa16.76■□□□□ 0.27
PSPC1-206ENST00000619300 TMEM272A0A1B0GTI8 110 aa16.75■□□□□ 0.27
PSPC1-206ENST00000619300 HMX3A6NHT5 357 aa16.75■□□□□ 0.27
PSPC1-206ENST00000619300 NKX2-8O15522 239 aa16.75■□□□□ 0.27
PSPC1-206ENST00000619300 KRT33AO76009 404 aa16.75■□□□□ 0.27
PSPC1-206ENST00000619300 ARSBP15848 533 aa16.75■□□□□ 0.27
PSPC1-206ENST00000619300 BDKRB2P30411 391 aa16.75■□□□□ 0.27
PSPC1-206ENST00000619300 PPIAP62937 165 aaKnown RBP16.75■□□□□ 0.27
PSPC1-206ENST00000619300 TATDN3Q17R31 274 aa16.75■□□□□ 0.27
PSPC1-206ENST00000619300 RIPPLY2Q5TAB7 128 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms