RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 GSTP1P09211 210 aaKnown RBP13.78□□□□□ -0.2
COL5A1-208ENST00000618395 TFAP2EQ6VUC0 442 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 FUNDC1Q8IVP5 155 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 OR5M1Q8NGP8 315 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 HMX2A2RU54 273 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 SOWAHCQ53LP3 525 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-208ENST00000618395 C3orf30Q96M34 536 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 ADGRL4Q9HBW9 690 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 KIR2DS1A0A191URI9 304 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 GEMIN2O14893 280 aaKnown RBP13.78□□□□□ -0.2
COL5A1-208ENST00000618395 NEURL1O76050 574 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 KIR2DS4P43632 304 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 KIR2DS1Q14954 304 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 BCL2L2Q92843 193 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-208ENST00000618395 GPR137Q96N19 417 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 ZNF140P52738 457 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-208ENST00000618395 EXT1Q16394 746 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 COX19Q49B96 90 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 TMEM128Q5BJH2 165 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 C12orf42Q96LP6 360 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 ST8SIA5O15466 376 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 GPX5O75715 221 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 HERVK_113P61574 105 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 MLF2Q15773 248 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-208ENST00000618395 SLC35D3Q5M8T2 416 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 SHARPINQ9H0F6 387 aa13.78□□□□□ -0.2
COL5A1-208ENST00000618395 A0A0D9SEW6 157 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 FAM3AP98173 230 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 ZNF124Q15973 351 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 SPATA45Q537H7 98 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 OR10G3Q8NGC4 313 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 UBALD1Q8TB05 177 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 RTP4Q96DX8 246 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 GPR20Q99678 358 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 RTP3Q9BQQ7 232 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 DEFB126Q9BYW3 111 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 IKZF5Q9H5V7 419 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 PSENENQ9NZ42 101 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 C1orf167Q5SNV9 1468 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 UBE2L5PA0A1B0GUS4 154 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 FAAP20Q6NZ36 180 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 OR5D18Q8NGL1 313 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.2
COL5A1-208ENST00000618395 SMAD4Q13485 552 aaKnown RBP13.77□□□□□ -0.2
COL5A1-208ENST00000618395 SYT14P1Q58G82 188 aa13.77□□□□□ -0.2
COL5A1-208ENST00000618395 PIAS2O75928 621 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 GLSO94925 669 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-208ENST00000618395 TBXA2RP21731 343 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 NSDHLQ15738 373 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 C10orf126Q8N4M7 172 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 DCAF4L2Q8NA75 395 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 SMIM4Q8WVI0 70 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 EID2BQ96D98 161 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 ZNF2Q9BSG1 426 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-208ENST00000618395 EMCNQ9ULC0 261 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 SP3Q02447 781 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 DRAM2Q6UX65 266 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 TMEM151BQ8IW70 566 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 MARVELD1Q9BSK0 173 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 MEIKINA0A087WXM9 373 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 DRGXA6NNA5 263 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 LIMS3P0CW19 117 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 LIMS4P0CW20 117 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 RPL11P62913 178 aaKnown RBP13.77□□□□□ -0.21
COL5A1-208ENST00000618395 KCNJ10P78508 379 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 GKN2Q86XP6 184 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 NDRG4Q9ULP0 352 aaKnown RBP13.77□□□□□ -0.21
COL5A1-208ENST00000618395 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
COL5A1-208ENST00000618395 RBFOX3A6NFN3 312 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 YIF1AO95070 293 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 TSEN54Q7Z6J9 526 aaKnown RBP13.77□□□□□ -0.21
COL5A1-208ENST00000618395 TOE1Q96GM8 510 aaKnown RBP13.77□□□□□ -0.21
COL5A1-208ENST00000618395 OR2A14Q96R47 310 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 NMNAT3Q96T66 252 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 FBXL12Q9NXK8 326 aa13.77□□□□□ -0.21
COL5A1-208ENST00000618395 ZNF737O75373 536 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 NUDT3O95989 172 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 PTGFRP43088 359 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 CTU2Q2VPK5 515 aaKnown RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 HLA-DRB5Q30154 266 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 C22orf39Q6P5X5 142 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 FAM216AQ8WUB2 273 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 MENTQ9BUN1 341 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 GCSHP23434 173 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 MDH2P40926 338 aaKnown RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 PRRX1P54821 245 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 C18orf21Q32NC0 220 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 UBE2FQ969M7 185 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 CEBPDP49716 269 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 MRPL2Q5T653 305 aaKnown RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 CITED1Q99966 193 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 FOXJ2Q9P0K8 574 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 PYCARD-AS1I3L0S3 204 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 FAM78BQ5VT40 261 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms