RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NPIPB7O75200 414 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SEC14L2O76054 403 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SCAF4O95104 1147 aaKnown RBP7.44□□□□□ -1.22
GPC6-202ENST00000617456 CD3GP09693 182 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 DAOP14920 347 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 CBLP22681 906 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 MPGP29372 298 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SDHAP31040 664 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 CDKN2CP42773 168 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 CDKN1BP46527 198 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 ATP4BP51164 291 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 OR2B6P58173 313 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 GMFBP60983 142 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 VAMP2P63027 116 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 FGL1Q08830 312 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 BTN1A1Q13410 526 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 RGNQ15493 299 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 MAPK11Q15759 364 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 GABRA6Q16445 453 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 ZNF674Q2M3X9 581 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 ZIK1Q3SY52 487 aaPredicted RBP7.44□□□□□ -1.22
GPC6-202ENST00000617456 COX20Q5RI15 118 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 KDM4DQ6B0I6 523 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 TMPRSS11FQ6ZWK6 438 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 MEX3DQ86XN8 651 aaKnown RBP7.44□□□□□ -1.22
GPC6-202ENST00000617456 RFLNBQ8N5W9 214 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 FAM169BQ8N8A8 192 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 BBS1Q8NFJ9 593 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 OR13F1Q8NGS4 319 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 MFSD8Q8NHS3 518 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 BBS10Q8TAM1 723 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SETD6Q8TBK2 473 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 RBPMSQ93062 196 aaKnown RBP7.44□□□□□ -1.22
GPC6-202ENST00000617456 FBXO17Q96EF6 278 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 CITED2Q99967 270 aaPredicted RBP7.44□□□□□ -1.22
GPC6-202ENST00000617456 DCUN1D5Q9BTE7 237 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 PDCD10Q9BUL8 212 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SPATA5L1Q9BVQ7 753 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 ANKRD60Q9BZ19 345 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 MIXL1Q9H2W2 232 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 ZCCHC4Q9H5U6 513 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SDHAF2Q9NX18 166 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 ZNF229Q9UJW7 825 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 RASD1Q9Y272 281 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 FLVCR1Q9Y5Y0 555 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SLC25A15Q9Y619 301 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 DYSFO75923 2080 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 ARFGEF3Q5TH69 2177 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 SERTM2A0A1B0GWG4 89 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 A0A1W2PPQ1 181 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 TMEM72A0PK05 275 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 LRP5LA4QPB2 252 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PRORSD1PA6NEY8 169 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 CLDN24A6NM45 220 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PRR23D1E9PI22 279 aaPredicted RBP7.43□□□□□ -1.22
GPC6-202ENST00000617456 CLIC1O00299 241 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 RGS5O15539 181 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 MED6O75586 246 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 WNT11O96014 354 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 C1QBP02746 253 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PRR23D2P0DMB1 279 aaPredicted RBP7.43□□□□□ -1.22
GPC6-202ENST00000617456 KITP10721 976 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 HOXB9P17482 250 aaPredicted RBP7.43□□□□□ -1.22
GPC6-202ENST00000617456 NDUFB7P17568 137 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 NME5P56597 212 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 TSPAN31Q12999 210 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 CAMK2DQ13557 499 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 DGCR6Q14129 220 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PNLIPRP3Q17RR3 467 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 CDNFQ49AH0 187 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PAN3Q58A45 887 aaKnown RBP7.43□□□□□ -1.22
GPC6-202ENST00000617456 ATPAF1Q5TC12 328 aaPredicted RBP7.43□□□□□ -1.22
GPC6-202ENST00000617456 C9orf135Q5VTT2 229 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 LPCAT4Q643R3 524 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 DLEU7Q6UYE1 221 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PGAP1Q75T13 922 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PRSS48Q7RTY5 328 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PIWIL3Q7Z3Z3 882 aaKnown RBP7.43□□□□□ -1.22
GPC6-202ENST00000617456 LYSMD2Q8IV50 215 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 ZNF561Q8N587 486 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 ADPRHL1Q8NDY3 354 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 NDNFQ8TB73 568 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 DEDD2Q8WXF8 326 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 DNAJA3Q96EY1 480 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 SORCS2Q96PQ0 1159 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 SPXQ9BT56 116 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 TAPBPLQ9BX59 468 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 LINC00470Q9BZP3 86 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 OR11A1Q9GZK7 315 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 ANKRD19PQ9H560 264 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 TMEM38AQ9H6F2 299 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 FKRPQ9H9S5 495 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 MCUBQ9NWR8 336 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 PTTG3PQ9NZH4 202 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 UPB1Q9UBR1 384 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 CLEC2DQ9UHP7 191 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 ZNF443Q9Y2A4 671 aaPredicted RBP7.43□□□□□ -1.22
GPC6-202ENST00000617456 PCDHB14Q9Y5E9 798 aa7.43□□□□□ -1.22
GPC6-202ENST00000617456 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms