RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 IL5P05113 134 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 MSR1P21757 451 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 SNU13P55769 128 aaKnown RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 SSBP1Q04837 148 aaKnown RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 GTPBP8Q8N3Z3 284 aaPredicted RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 TMEM185AQ8NFB2 350 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 OR2AK2Q8NG84 335 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 OR10AC1Q8NH08 325 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 BANF2Q9H503 90 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 SLC17A5Q9NRA2 495 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 LANCL2Q9NS86 450 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 PCDHGA9Q9Y5G4 932 aaKnown RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 PTPRZ1P23471 2315 aaPredicted RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 F8W036 122 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 UBBP0CG47 229 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 TAS2R46P59540 309 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 RPS27AP62979 156 aaKnown RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 VAMP2P63027 116 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 BLOC1S1P78537 153 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 SLC9A3R2Q15599 337 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 HLA-BQ31612 363 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 WDR74Q6RFH5 385 aaPredicted RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 CHAC2Q8WUX2 184 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 ZCCHC4Q9H5U6 513 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 ASF1BQ9NVP2 202 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 ANKRD20A5PA0PJZ0 165 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 VAMP5O95183 116 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 HTR5AP47898 357 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 PER3P56645 1201 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 ZBTB37Q5TC79 503 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 RTL6Q6ICC9 239 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 PRSS42Q7Z5A4 293 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 SGPP2Q8IWX5 399 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 ARL5BQ96KC2 179 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 PADI1Q9ULC6 663 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 HDGFL3Q9Y3E1 203 aa12.6□□□□□ -0.39
SSBP2-220ENST00000615665 TMEM184BQ9Y519 407 aaPredicted RBP12.6□□□□□ -0.39
SSBP2-220ENST00000615665 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 GAS1P54826 345 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 MTCP1P56278 107 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 CLDN6P56747 220 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 TMUB2Q71RG4 321 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 BPHLQ86WA6 291 aaPredicted RBP12.59□□□□□ -0.39
SSBP2-220ENST00000615665 LSRQ86X29 649 aaPredicted RBP12.59□□□□□ -0.39
SSBP2-220ENST00000615665 NOXO1Q8NFA2 376 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 NUDCD2Q8WVJ2 157 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 A0A0A6YYH2 397 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 A6NJ64 397 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 ENPP1P22413 925 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 EXOSC2Q13868 293 aaKnown RBP12.59□□□□□ -0.39
SSBP2-220ENST00000615665 KLF9Q13886 244 aaPredicted RBP12.59□□□□□ -0.39
SSBP2-220ENST00000615665 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 C4orf47A7E2U8 309 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 ATP6V1G2-DDX39BF2Z307 99 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 DCTN6O00399 190 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 EPHA8P29322 1005 aaPredicted RBP12.59□□□□□ -0.39
SSBP2-220ENST00000615665 PCBD1P61457 104 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 DEGS2Q6QHC5 323 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 SLC16A14Q7RTX9 510 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 MAML2Q8IZL2 1156 aaPredicted RBP12.59□□□□□ -0.39
SSBP2-220ENST00000615665 DLL4Q9NR61 685 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 PARPBPQ9NWS1 579 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 MYOTQ9UBF9 498 aa12.59□□□□□ -0.39
SSBP2-220ENST00000615665 IGKV1D-42A0A075B6H8 117 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 M6PRP20645 277 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 LTBRP36941 435 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 RGS19P49795 217 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 CARD18P57730 90 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 FXYD4P59646 89 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 TEX261Q6UWH6 196 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 MDGA2Q7Z553 956 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 NUBPLQ8TB37 319 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 SCMH1Q96GD3 660 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 METTL9Q9H1A3 318 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 SLC5A6Q9Y289 635 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 U3KQ87 197 aa12.58□□□□□ -0.39
SSBP2-220ENST00000615665 SVILO95425 2214 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 TMEM200CA6NKL6 621 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 TOX3O15405 576 aaPredicted RBP12.58□□□□□ -0.4
SSBP2-220ENST00000615665 TXNDC12O95881 172 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 CDAP32320 146 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 SLC51BQ86UW2 128 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 OR51A4Q8NGJ6 313 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 PIGTQ969N2 578 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 BOKQ9UMX3 212 aaPredicted RBP12.58□□□□□ -0.4
SSBP2-220ENST00000615665 E9PQ18 207 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 NPIPB9F8W1W9 429 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 TOR1AO14656 332 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 BPNT1O95861 308 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 OR4E1P0C645 316 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 CPT2P23786 658 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 ZNF616Q08AN1 781 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 MICU1Q9BPX6 476 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 RAB33BQ9H082 229 aa12.58□□□□□ -0.4
SSBP2-220ENST00000615665 ZNF768Q9H5H4 540 aaKnown RBP12.58□□□□□ -0.4
SSBP2-220ENST00000615665 UTRNP46939 3433 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms