RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 HOXA6P31267 233 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 RPS27P42677 84 aaKnown RBP8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 HMGA2P52926 109 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 NKX2-5P52952 324 aaPredicted RBP8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 EDDM3AQ14507 147 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 C9orf40Q8IXQ3 194 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 PARP16Q8N5Y8 322 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 TMEM185AQ8NFB2 350 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 ZNF721Q8TF20 911 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 TECTBQ96PL2 329 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 CES1P1Q9UKY3 287 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 KIR2DS1A0A191URI9 304 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 FAM90A27PA6NNH2 459 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 ZNF732B4DXR9 585 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 SH2D1BO14796 132 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 CCL3P10147 92 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 DDOSTP39656 456 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 KIR2DS4P43632 304 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 TMPRSS3P57727 454 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 KIR2DS1Q14954 304 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 HYLS1Q96M11 299 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 PLA2G12AQ9BZM1 189 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 NOX3Q9HBY0 568 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 C20orf141Q9NUB4 165 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 SLCO1C1Q9NYB5 712 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 ZNF816-ZNF321PA0A0X1KG74 233 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 A0A1W2PQM1 296 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 TRABD2BA6NFA1 517 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 LRP3O75074 770 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 MT-ND4P03905 459 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 SP1P08047 785 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 CDAP32320 146 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 ZNF121P58317 390 aaPredicted RBP8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 CD226Q15762 336 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 AADACL3Q5VUY0 350 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 HAGHLQ6PII5 290 aaPredicted RBP8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 PLXDC2Q6UX71 529 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 FBXL14Q8N1E6 418 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 TMEM105Q8N8V8 129 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 TMEM52Q8NDY8 209 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 OTOSQ8NHW6 89 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 GUCD1Q96NT3 240 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 NTN4Q9HB63 628 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 LSM5Q9Y4Y9 91 aaKnown RBP8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 THSD7BQ9C0I4 1608 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 A0A0G2JMP0 313 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 A0A1W2PS29 197 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 F5H5P2 479 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 HRKO00198 91 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 PLPP3O14495 311 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 GLRA1P23415 457 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 MAGEA5P43359 124 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 CAV2P51636 162 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 CLDN6P56747 220 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 RHEBQ15382 184 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 APOOLQ6UXV4 268 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 CD300LDQ6UXZ3 194 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 OR2M7Q8NG81 312 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 OR4M2Q8NGB6 313 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 GLYATL2Q8WU03 294 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 TGIF2Q9GZN2 237 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 PPIL3Q9H2H8 161 aaKnown RBP8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 NDUFB11Q9NX14 153 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 QPCTLQ9NXS2 382 aa8.48□□□□□ -1.05
CLTCL1-208ENST00000615606 PRR33A8MZF0 331 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 CT45A8P0DMV1 189 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 CT45A9P0DMV2 189 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 ACP1P24666 158 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 GIFP27352 417 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 CAMK2BQ13554 666 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 PCK2Q16822 640 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 CT45A2Q5DJT8 189 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 AGAP6Q5VW22 663 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 DRAM2Q6UX65 266 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 OR2G2Q8NGZ5 317 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 OR4Q3Q8NH05 313 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 OR8B4Q96RC9 309 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 TMEM100Q9NV29 134 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 ZNF391Q9UJN7 358 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 LCTP09848 1927 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 GPR137BO60478 399 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 GDNFP39905 211 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 RPL23AP62750 156 aaKnown RBP8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 C12orf45Q8N5I9 185 aaPredicted RBP8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 RND1Q92730 232 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 KIRREL1Q96J84 757 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 SDHAF2Q9NX18 166 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 PRELID3BQ9Y3B1 194 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 GLAP06280 429 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 HTR2AP28223 471 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 PTGER4P35408 488 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 ECI1P42126 302 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 ALDH3B2P48448 385 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 SNRPD2P62316 118 aaKnown RBP8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 CDK5Q00535 292 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 RBMS2Q15434 407 aaKnown RBP8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 LSMEM1Q8N8F7 131 aa8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 FAM83FQ8NEG4 500 aaPredicted RBP8.47□□□□□ -1.05
CLTCL1-208ENST00000615606 SLC22A13Q9Y226 551 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms