RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TMEM99Q8N816 258 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 H1FXQ92522 213 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 PDCD1LG2Q9BQ51 273 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SHARPINQ9H0F6 387 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CXXC1Q9P0U4 656 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 MMP17Q9ULZ9 603 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SLC17A4Q9Y2C5 497 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 XRCC3O43542 346 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ICOSLGO75144 302 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 S100A8P05109 93 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 HMGA1P17096 107 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 ALOX5APP20292 161 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 BMI1P35226 326 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 MMP15P51511 669 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 NDUFA6P56556 154 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 UBE2MP61081 183 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 TSEN54Q7Z6J9 526 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 ABI3BPQ7Z7G0 1075 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 OR13H1Q8NG92 308 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 OR10R2Q8NGX6 335 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 OR10Z1Q8NGY1 313 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CXorf58Q96LI9 332 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZNF2Q9BSG1 426 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 GAREM1Q9H706 876 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZNF391Q9UJN7 358 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 FLVCR1Q9Y5Y0 555 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 DICER1Q9UPY3 1922 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 IFITM5A6NNB3 132 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 BCL2L11O43521 198 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LIMS3P0CW19 117 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LIMS4P0CW20 117 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 BSGP35613 385 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 RPL18Q07020 188 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 SMAD4Q13485 552 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 FAM53BQ14153 422 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LPAL2Q16609 132 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 TIGITQ495A1 244 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 RNF165Q6ZSG1 346 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 RFLNAQ6ZTI6 216 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 FAM58AQ8N1B3 248 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 TMEM229BQ8NBD8 167 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SPPL3Q8TCT6 385 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 OIT3Q8WWZ8 545 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 TAS2R5Q9NYW4 299 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 GAB2Q9UQC2 676 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 A0A0A6YYD5 115 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LINC01553A4QN01 128 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 STMND1H3BQB6 276 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZNF195O14628 629 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ACKR3P25106 362 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 GABRA4P48169 554 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 NOVA1P51513 510 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 PNLIPRP2P54317 469 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 EDDM3BP56851 147 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 TOMM34Q15785 309 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 Q8IYB0 196 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 NHLRC2Q8NBF2 726 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 FAM71CQ8NEG0 241 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 Q96M85 177 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 GINS3Q9BRX5 216 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 PBOV1Q9GZY1 135 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 FAM234AQ9H0X4 552 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 NTN4Q9HB63 628 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SLC35D1Q9NTN3 355 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CGGBP1Q9UFW8 167 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 CHD5Q8TDI0 1954 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 HMX2A2RU54 273 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 TMEM202A6NGA9 273 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 ANKRD61A6NGH8 418 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 SERPINE3A8MV23 424 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 K7ESM1 405 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 M0R135 149 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 QDPRP09417 244 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 CLEC2LP0C7M8 214 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 GABRB1P18505 474 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 ARRB2P32121 409 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 KIR2DS2P43631 304 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 SLC25A1P53007 311 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 ERHP84090 104 aaKnown RBP4.15□□□□□ -1.74
CHD9-221ENST00000615216 H3F3CQ6NXT2 135 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 ANKRD16Q6P6B7 361 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 TMEM182Q6ZP80 229 aaPredicted RBP4.15□□□□□ -1.74
CHD9-221ENST00000615216 MOB1BQ7L9L4 216 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 SLCO4A1Q96BD0 722 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 ZNF799Q96GE5 643 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 S1PR3Q99500 378 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 C12orf49Q9H741 205 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 AKIP1Q9NQ31 210 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 GPR173Q9NS66 373 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 RYDENQ9NUL5 291 aaKnown RBP4.15□□□□□ -1.74
CHD9-221ENST00000615216 CHST2Q9Y4C5 530 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 TMEM235A6NFC5 223 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 HS3ST1O14792 307 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 FUCA1P04066 466 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 ELLP55199 621 aaPredicted RBP4.15□□□□□ -1.74
CHD9-221ENST00000615216 SLC17A1Q14916 467 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 CDK5R1Q15078 307 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 PRAMEF5Q5TYX0 476 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 PRAMEF6Q5VXH4 476 aa4.15□□□□□ -1.74
CHD9-221ENST00000615216 ZNF705AQ6ZN79 300 aaPredicted RBP4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms