RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FZD2Q14332 565 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 NPWQ8N729 165 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 TRMT12Q53H54 448 aaKnown RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 CYB5R2Q6BCY4 276 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 SECTM1Q8WVN6 248 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 EMID1Q96A84 441 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 DCBLD2Q96PD2 775 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 ACER3Q9NUN7 267 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 MPC2O95563 127 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CFHP08603 1231 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 FURINP09958 794 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 SELPP16109 830 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 AKR1C3P42330 323 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PLP1P60201 277 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 TGFBR3Q03167 851 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 Q1RN00 199 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 OR5M10Q6IEU7 315 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 MTMR14Q8NCE2 650 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 SH3RF2Q8TEC5 729 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 RAB6CQ9H0N0 254 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 MTFP1Q9UDX5 166 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 FCN1O00602 326 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 SIGLEC5O15389 551 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 LCATP04180 440 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 INHBBP09529 407 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PGA4P0DJD7 388 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PGA5P0DJD9 388 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 ARSDP51689 593 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 FABP5Q01469 135 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PRSS54Q6PEW0 395 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 F2RL3Q96RI0 385 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PRR14Q9BWN1 585 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 MARCH5Q9NX47 278 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PLSCR1O15162 318 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 HAPLN1P10915 354 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 LIPCP11150 499 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 NDUFB7P17568 137 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 IL2RGP31785 369 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PLA1AQ53H76 456 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 NPSR1Q6W5P4 371 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 COPS9Q8WXC6 57 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 LDB2O43679 373 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CLEC2LP0C7M8 214 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 AOAHP28039 575 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CDK5R1Q15078 307 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 DRAM2Q6UX65 266 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 ZNF100Q8IYN0 542 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 Q9Y3F1 56 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 TRAV27A0A087WT01 109 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 A0A0B4J203 849 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 H0Y8G0 127 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 SUSD5O60279 629 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 GALR3O60755 368 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 LILRB3O75022 631 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 GLSO94925 669 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 GAPDHP04406 335 aaKnown RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 ST6GAL1P15907 406 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PTNP21246 168 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CD68P34810 354 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 GNG4P50150 75 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 GPNMBQ14956 572 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 NKAIN2Q5VXU1 208 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CARFQ8N187 725 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 FAM173AQ9BQD7 235 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 GOLGA2P5Q9HBQ8 144 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 HIF1ANQ9NWT6 349 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 RBBP6Q7Z6E9 1792 aaKnown RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 LOC102723971A0A1B0GUV8 181 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 A6NIN4 97 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 NCBP2LA6PVI3 153 aaKnown RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 KLK3P07288 261 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 PTGFRP43088 359 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CDC20BQ86Y33 519 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CMTM4Q8IZR5 234 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 PRRX2Q99811 253 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 TMEM231Q9H6L2 316 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 OR5V1Q9UGF6 321 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 ZNF729A6NN14 1252 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 TMEM189-UBE2V1I3L0A0 370 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 ZNF749O43361 778 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 APLNRP35414 380 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 GPM6AP51674 278 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 ATP5IP56385 69 aaPredicted RBP8.03□□□□□ -1.12
TTC28-208ENST00000612946 CD300LDQ6UXZ3 194 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 MTCH1Q9NZJ7 389 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 CDC42EP3Q9UKI2 254 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 MDC1Q14676 2089 aaKnown RBP8.02□□□□□ -1.12
TTC28-208ENST00000612946 HMGN2P05204 90 aaKnown RBP8.02□□□□□ -1.12
TTC28-208ENST00000612946 GABRA1P14867 456 aa8.02□□□□□ -1.12
TTC28-208ENST00000612946 HOXA6P31267 233 aa8.02□□□□□ -1.12
TTC28-208ENST00000612946 DEFB134Q4QY38 66 aa8.02□□□□□ -1.12
TTC28-208ENST00000612946 SOWAHCQ53LP3 525 aaPredicted RBP8.02□□□□□ -1.12
TTC28-208ENST00000612946 RNF165Q6ZSG1 346 aa8.02□□□□□ -1.12
TTC28-208ENST00000612946 SLC35E1Q96K37 410 aa8.02□□□□□ -1.12
TTC28-208ENST00000612946 NAGKQ9UJ70 344 aa8.02□□□□□ -1.12
TTC28-208ENST00000612946 VDAC3Q9Y277 283 aa8.02□□□□□ -1.12
TTC28-208ENST00000612946 PRICKLE3O43900 615 aaPredicted RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 ARSIQ5FYB1 569 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 ZNF761Q86XN6 746 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms