RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MDGA2Q7Z553 956 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 LYPD6Q86Y78 171 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 GABRG1Q8N1C3 465 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 MUC20Q8N307 709 aaPredicted RBP13.1□□□□□ -0.31
CDH1-213ENST00000612417 NKAIN3Q8N8D7 197 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 OR5M1Q8NGP8 315 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 SEH1LQ96EE3 360 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 KCNK17Q96T54 332 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 POTEKPQ9BYX7 375 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 MYOZ1Q9NP98 299 aaPredicted RBP13.1□□□□□ -0.31
CDH1-213ENST00000612417 NUP50Q9UKX7 468 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 EMC9Q9Y3B6 208 aa13.1□□□□□ -0.31
CDH1-213ENST00000612417 MRPS18BQ9Y676 258 aaKnown RBP13.1□□□□□ -0.31
CDH1-213ENST00000612417 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 LOC107986453A0A1B0GWG9 222 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 PRR33A8MZF0 331 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 I3L521 148 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 MPZL1O95297 269 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 HRGP04196 525 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 UMODP07911 640 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 ZNF823P16415 610 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 APOBEC1P41238 236 aaKnown RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 FOLR3P41439 243 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 FBXW4P57775 412 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 C17orf67Q0P5P2 114 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 C6orf15Q6UXA7 325 aaPredicted RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 H1FNTQ75WM6 255 aaPredicted RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 OR13C3Q8NGS6 347 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 WDR89Q96FK6 387 aaPredicted RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 UPB1Q9UBR1 384 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 OR52A1Q9UKL2 312 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 PADI1Q9ULC6 663 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 F5H5P2 479 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 ETV2O00321 342 aaPredicted RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 KLF7O75840 302 aaPredicted RBP13.09□□□□□ -0.31
CDH1-213ENST00000612417 MT-CO3P00414 261 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 IL11P20809 199 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 S100A11P31949 105 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 C2orf68Q2NKX9 166 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 DHRS13Q6UX07 377 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 OR2Y1Q8NGV0 311 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 RNF138Q8WVD3 245 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 ZPBPQ9BS86 351 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 FANCFQ9NPI8 374 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 MED9Q9NWA0 146 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
CDH1-213ENST00000612417 OTOGLQ3ZCN5 2332 aa13.08□□□□□ -0.31
CDH1-213ENST00000612417 MEIS3P1A6NDR6 274 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 H3BUI4 141 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 ZNF208O43345 1280 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.32
CDH1-213ENST00000612417 PMS2P2O95744 297 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
CDH1-213ENST00000612417 RAB6AP20340 208 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 DNASE1L1P49184 302 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 PCOLCEQ15113 449 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 TMEM244Q5VVB8 128 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 DCXRQ7Z4W1 244 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 OR51A2Q8NGJ7 313 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 LRRC20Q8TCA0 184 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 CCDC107Q8WV48 283 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 WBP1Q96G27 269 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 NARFLQ9H6Q4 476 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 EXO5Q9H790 373 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 PHF3Q92576 2039 aaKnown RBP13.08□□□□□ -0.32
CDH1-213ENST00000612417 RAB3DO95716 219 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 CD74P04233 296 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 ZNF35P13682 527 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 CALCRP30988 508 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 CBX5P45973 191 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 MMP16P51512 607 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 FMODQ06828 376 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 HLXQ14774 488 aaPredicted RBP13.08□□□□□ -0.32
CDH1-213ENST00000612417 KDM8Q8N371 416 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 TNFAIP8L1Q8WVP5 186 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 RNF133Q8WVZ7 376 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 FOXRED1Q96CU9 486 aaPredicted RBP13.08□□□□□ -0.32
CDH1-213ENST00000612417 LIN37Q96GY3 246 aaPredicted RBP13.08□□□□□ -0.32
CDH1-213ENST00000612417 ARL5BQ96KC2 179 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 NPAS1Q99742 590 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 CHST11Q9NPF2 352 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 MYOTQ9UBF9 498 aa13.08□□□□□ -0.32
CDH1-213ENST00000612417 CGGBP1Q9UFW8 167 aaPredicted RBP13.08□□□□□ -0.32
CDH1-213ENST00000612417 LOC102723996A0A087X1L8 192 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 IGHV1-45A0A0A0MS14 117 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 TMEM269A0A1B0GVZ9 245 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 TMEM200CA6NKL6 621 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 GOSR2O14653 212 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 OR2J2O76002 312 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 TCN2P20062 427 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 HSF1Q00613 529 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 PMPCAQ10713 525 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 OR7A5Q15622 319 aa13.07□□□□□ -0.32
CDH1-213ENST00000612417 TRIP6Q15654 476 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms