RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 MAML2Q8IZL2 1156 aaPredicted RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 GPR119Q8TDV5 335 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 PSMF1Q92530 271 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 RPS10-NUDT3A0A1W2PQS6 291 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 RPS10P46783 165 aaKnown RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 MECP2P51608 486 aaKnown RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 NKX6-1P78426 367 aaPredicted RBP11.22□□□□□ -0.61
CDH1-212ENST00000611625 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 PWWP2BQ6NUJ5 590 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 ZAR1Q86SH2 424 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 BAP18Q8IXM2 172 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 LGI3Q8N145 548 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 OR5T1Q8NG75 326 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 OR4S1Q8NGB4 309 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 MOGAT1Q96PD6 335 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 WFDC6Q9BQY6 131 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 NECAP2Q9NVZ3 263 aa11.22□□□□□ -0.61
CDH1-212ENST00000611625 ANKRD20A5PA0PJZ0 165 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 CTAG2O75638 210 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 GPANK1O95872 356 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 COL9A1P20849 921 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 SCAND1P57086 179 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 PPP1CAP62136 330 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 PSG6Q00889 435 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 PCK2Q16822 640 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 CBLN3Q6UW01 205 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 MUC20Q8N307 709 aaPredicted RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 GALNT16Q8N428 558 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 PIGQQ9BRB3 760 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 MCRIP1C9JLW8 97 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 CTDSPLO15194 276 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 BCL2L11O43521 198 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 LANCL1O43813 399 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 ENPP1P22413 925 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 FKBP2P26885 142 aaKnown RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 SELENOVP59797 346 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 CLINT1Q14677 625 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 TSPAN32Q96QS1 320 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 FAM60AQ9NP50 221 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 FBXO4Q9UKT5 387 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 BOKQ9UMX3 212 aaPredicted RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 TNS1Q9HBL0 1735 aaKnown RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 OTOL1A6NHN0 477 aaPredicted RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 SGCEO43556 437 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 IKZF1Q13422 519 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 HLXQ14774 488 aaPredicted RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 TOMM34Q15785 309 aaPredicted RBP11.21□□□□□ -0.61
CDH1-212ENST00000611625 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDH1-212ENST00000611625 SOHLH1Q5JUK2 328 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 ZNF626Q68DY1 528 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 WDR5BQ86VZ2 330 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 SEMA6DQ8NFY4 1073 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 GPBAR1Q8TDU6 330 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 SMCO4Q9NRQ5 59 aa11.21□□□□□ -0.61
CDH1-212ENST00000611625 CD63P08962 238 aa11.21□□□□□ -0.62
CDH1-212ENST00000611625 FOXF1Q12946 379 aa11.21□□□□□ -0.62
CDH1-212ENST00000611625 ZNF813Q6ZN06 617 aa11.21□□□□□ -0.62
CDH1-212ENST00000611625 GRAMD2AQ8IUY3 354 aa11.21□□□□□ -0.62
CDH1-212ENST00000611625 ZNF845Q96IR2 970 aaPredicted RBP11.21□□□□□ -0.62
CDH1-212ENST00000611625 MRM2Q9UI43 246 aaKnown RBP11.21□□□□□ -0.62
CDH1-212ENST00000611625 GDF2Q9UK05 429 aaPredicted RBP11.21□□□□□ -0.62
CDH1-212ENST00000611625 CENPVL1A0A0U1RR11 272 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 VAMP5O95183 116 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 GSTP1P09211 210 aaKnown RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 FOSL2P15408 326 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 SELENOPP49908 381 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 IDH3GP51553 393 aaPredicted RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 CARD18P57730 90 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 PLA1AQ53H76 456 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 NHLRC1Q6VVB1 395 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 OR11H7Q8NGC8 314 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 OR6K3Q8NGY3 331 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 GPR173Q9NS66 373 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 SIRT4Q9Y6E7 314 aaPredicted RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 EML2O95834 649 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 SULT1A3P0DMM9 295 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 SULT1A4P0DMN0 295 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 ERGP11308 486 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 RNF4P78317 190 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 PRSS42Q7Z5A4 293 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 LSMEM1Q8N8F7 131 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 NPEPL1Q8NDH3 523 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 EMG1Q92979 244 aaKnown RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 C8orf44Q96CB5 159 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 MRGPRX4Q96LA9 322 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 ZNF2Q9BSG1 426 aaPredicted RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 ZNF576Q9H609 170 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 ICAM2P13598 275 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 ZP3P21754 424 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 LPAL2Q16609 132 aa11.2□□□□□ -0.62
CDH1-212ENST00000611625 PAN3Q58A45 887 aaKnown RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.2□□□□□ -0.62
CDH1-212ENST00000611625 LIPHQ8WWY8 451 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms