RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 HINT3Q9NQE9 182 aaKnown RBP16.33■□□□□ 0.2
SGMS1-208ENST00000608287 PDP1Q9P0J1 537 aaPredicted RBP16.33■□□□□ 0.2
SGMS1-208ENST00000608287 BAIAP2Q9UQB8 552 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 ARRDC5A6NEK1 342 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 OR6C6A6NF89 314 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 POM121CA8CG34 1229 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 H3BN98 237 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 J3QLI3 93 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 ICMTO60725 284 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 HPXP02790 462 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 MT-ND5P03915 603 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 PYCR1P32322 319 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 TMEM33P57088 247 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 UBA52P62987 128 aaKnown RBP16.32■□□□□ 0.2
SGMS1-208ENST00000608287 CD300LDQ6UXZ3 194 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 C1QL2Q7Z5L3 287 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 SLC37A3Q8NCC5 494 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 PROKR2Q8NFJ6 384 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 OR2T4Q8NH00 348 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 TEX47Q8TBZ9 253 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 KLF14Q8TD94 323 aaPredicted RBP16.32■□□□□ 0.2
SGMS1-208ENST00000608287 DNAJB9Q9UBS3 223 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 KLHL21Q9UJP4 597 aa16.32■□□□□ 0.2
SGMS1-208ENST00000608287 C17orf100A8MU93 164 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 MAGEB1P43366 347 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 HIST1H3AP68431 136 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 ELFN2Q5R3F8 820 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 ZNF362Q5T0B9 420 aaPredicted RBP16.31■□□□□ 0.2
SGMS1-208ENST00000608287 HIST2H3PS2Q5TEC6 136 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 MBNL2Q5VZF2 373 aaKnown RBP16.31■□□□□ 0.2
SGMS1-208ENST00000608287 HIST2H3AQ71DI3 136 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 LINC00346Q8IVM7 164 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 PAPD5Q8NDF8 572 aaKnown RBP16.31■□□□□ 0.2
SGMS1-208ENST00000608287 OR9Q1Q8NGQ5 310 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 OR2AJ1Q8NGZ0 328 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 GTF3AQ92664 365 aaKnown RBP16.31■□□□□ 0.2
SGMS1-208ENST00000608287 SLCO4A1Q96BD0 722 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 DDOQ99489 341 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 TBCCD1Q9NVR7 557 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 ATPIF1Q9UII2 106 aa16.31■□□□□ 0.2
SGMS1-208ENST00000608287 PLSCR5A0PG75 271 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 H3BSA7 217 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 NCR1O76036 304 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 IFNGP01579 166 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 DBHP09172 617 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 ZNF823P16415 610 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 IL13RA1P78552 427 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 CCL8P80075 99 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 MRPS11P82912 194 aaKnown RBP16.3■□□□□ 0.2
SGMS1-208ENST00000608287 CRMP1Q14194 572 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 PCGF3Q3KNV8 242 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 TMEM255AQ5JRV8 349 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 HS3ST5Q8IZT8 346 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 OR51L1Q8NGJ5 315 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 RDH5Q92781 318 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 SLC6A7Q99884 636 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 HDHD2Q9H0R4 259 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 MMADHCQ9H3L0 296 aaPredicted RBP16.3■□□□□ 0.2
SGMS1-208ENST00000608287 ZNF556Q9HAH1 456 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 MRPL22Q9NWU5 206 aaKnown RBP16.3■□□□□ 0.2
SGMS1-208ENST00000608287 TRRAPQ9Y4A5 3859 aa16.3■□□□□ 0.2
SGMS1-208ENST00000608287 LOC105371242A0A075B767 164 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 TVP23AA6NH52 213 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 RIIAD1A6NNX1 92 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 TPD52L2O43399 206 aaKnown RBP16.29■□□□□ 0.2
SGMS1-208ENST00000608287 TIPRLO75663 272 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 PRKACGP22612 351 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 GATA3P23771 443 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 COL8A2P25067 703 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 POU1F1P28069 291 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 ZNF81P51508 661 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 TSTQ16762 297 aaKnown RBP16.29■□□□□ 0.2
SGMS1-208ENST00000608287 SLC18B1Q6NT16 456 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 CFAP77Q6ZQR2 320 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 IQCF1Q8N6M8 205 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 ZDHHC22Q8N966 263 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 ZNRF4Q8WWF5 429 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 DCLRE1CQ96SD1 692 aaKnown RBP16.29■□□□□ 0.2
SGMS1-208ENST00000608287 PITX2Q99697 317 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 COQ7Q99807 217 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 POFUT1Q9H488 388 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 NARFLQ9H6Q4 476 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 CYB5R1Q9UHQ9 305 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 STARD10Q9Y365 291 aa16.29■□□□□ 0.2
SGMS1-208ENST00000608287 SPRY3O43610 288 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 TIMM8AO60220 97 aaPredicted RBP16.28■□□□□ 0.2
SGMS1-208ENST00000608287 GYPBP06028 91 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 ANXA8P13928 327 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 ZNF3P17036 446 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 GRK5P34947 590 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 GGT2P36268 569 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 MMP15P51511 669 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 C1orf146Q5VVC0 180 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 ACSM5Q6NUN0 579 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 ATG16L2Q8NAA4 619 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 RAB39BQ96DA2 213 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 COG8Q96MW5 612 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 SLITRK2Q9H156 845 aa16.28■□□□□ 0.2
SGMS1-208ENST00000608287 UNKLQ9H9P5 680 aaKnown RBP16.28■□□□□ 0.2
SGMS1-208ENST00000608287 CMC2Q9NRP2 79 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms