RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZNF433Q8N7K0 673 aaPredicted RBP18.91■□□□□ 0.62
USP6NL-204ENST00000606752 OR13C3Q8NGS6 347 aa18.91■□□□□ 0.62
USP6NL-204ENST00000606752 SPTSSAQ969W0 71 aa18.91■□□□□ 0.62
USP6NL-204ENST00000606752 GPR137Q96N19 417 aa18.91■□□□□ 0.62
USP6NL-204ENST00000606752 GFI1Q99684 422 aa18.91■□□□□ 0.62
USP6NL-204ENST00000606752 LUZP4Q9P127 313 aa18.91■□□□□ 0.62
USP6NL-204ENST00000606752 LAMA5O15230 3695 aa18.91■□□□□ 0.62
USP6NL-204ENST00000606752 SYNGR3O43761 229 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 TMEM127O75204 238 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 SLC2A1P11166 492 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 OR3A2P47893 321 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 PSMD7P51665 324 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 FBXW9Q5XUX1 488 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 OR8B12Q8NGG6 310 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 DIRAS2Q96HU8 199 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 MALT1Q9UDY8 824 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 PRSS50Q9UI38 385 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 N6AMT1Q9Y5N5 214 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 SYT7O43581 403 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 HPGDSO60760 199 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 ANXA2P07355 339 aaKnown RBP18.9■□□□□ 0.62
USP6NL-204ENST00000606752 PATE4P0C8F1 98 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 ATF1P18846 271 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 ID4P47928 161 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 FOXG1P55316 489 aaPredicted RBP18.9■□□□□ 0.62
USP6NL-204ENST00000606752 PSG4Q00888 419 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 C9orf135Q5VTT2 229 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 ZNF774Q6NX45 483 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 FAM57BQ71RH2 274 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 OR1F12Q8NHA8 337 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 FGFBP3Q8TAT2 258 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 SNRNP27Q8WVK2 155 aaKnown RBP18.9■□□□□ 0.62
USP6NL-204ENST00000606752 OR2H1Q9GZK4 316 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 ABRACLQ9P1F3 81 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 ADAM30Q9UKF2 790 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 FOXJ3Q9UPW0 622 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 FREM1Q5H8C1 2179 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 CACNA1GO43497 2377 aa18.9■□□□□ 0.62
USP6NL-204ENST00000606752 IFITM5A6NNB3 132 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 M0R135 149 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 SLC19A2O60779 497 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 MMP7P09237 267 aaPredicted RBP18.89■□□□□ 0.61
USP6NL-204ENST00000606752 ADRA2CP18825 462 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 CRYGSP22914 178 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 GUSBP1Q15486 140 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 ACSF3Q4G176 576 aaPredicted RBP18.89■□□□□ 0.61
USP6NL-204ENST00000606752 KRTCAP3Q53RY4 240 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 FAM180AQ6UWF9 173 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 FAM214BQ7L5A3 538 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 FGD2Q7Z6J4 655 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 OR51E1Q8TCB6 317 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF799Q96GE5 643 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 SLC17A5Q9NRA2 495 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF319Q9P2F9 582 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 CKLFQ9UBR5 152 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 V9GYH0 126 aa18.89■□□□□ 0.61
USP6NL-204ENST00000606752 ANKRD11Q6UB99 2663 aaPredicted RBP18.89■□□□□ 0.61
USP6NL-204ENST00000606752 A0A1B0GTI1 187 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 A0A1B0GVI7 797 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 OR6C6A6NF89 314 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 AIPO00170 330 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 MAS1P04201 325 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 EVX1P49640 407 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 SF3B4Q15427 424 aaKnown RBP eCLIP18.88■□□□□ 0.61
USP6NL-204ENST00000606752 SLC36A2Q495M3 483 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 NAA40Q86UY6 237 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 AKR7LQ8NHP1 331 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 SLC7A6Q92536 515 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 WNT5BQ9H1J7 359 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF275Q9NSD4 429 aaPredicted RBP18.88■□□□□ 0.61
USP6NL-204ENST00000606752 FABP12A6NFH5 140 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 PAHP00439 452 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 DBHP09172 617 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 FSTP19883 344 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 MPGP29372 298 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 SLC6A9P48067 706 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 NSUN5P2Q63ZY6 315 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 ASPHD2Q6ICH7 369 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF585AQ6P3V2 769 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 TRMT10AQ8TBZ6 339 aaKnown RBP18.88■□□□□ 0.61
USP6NL-204ENST00000606752 PGAM5Q96HS1 289 aa18.88■□□□□ 0.61
USP6NL-204ENST00000606752 PTPRQQ9UMZ3 2332 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 A0A096LPE4 126 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 A0A1W2PPZ6 126 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 ANXA2P2A6NMY6 339 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 IGFBP3P17936 291 aaPredicted RBP18.87■□□□□ 0.61
USP6NL-204ENST00000606752 TPTEP56180 551 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 CXADRP78310 365 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 OR2A2Q6IF42 318 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 DRAM2Q6UX65 266 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 GCNT2Q8N0V5 402 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 C9orf106Q8NAJ2 232 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 GPR84Q9NQS5 396 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF71Q9NQZ8 489 aaPredicted RBP18.87■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF224Q9NZL3 707 aa18.87■□□□□ 0.61
USP6NL-204ENST00000606752 CCL1P22362 96 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 HTR5AP47898 357 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 IFITM3Q01628 133 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 KRTAP27-1Q3LI81 207 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF324BQ6AW86 544 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms