RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 MSRB3Q8IXL7 192 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■□□ 18.4
NEDD8-MDP1-204ENST00000605847 CLPTM1LQ96KA5 538 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CPPED1Q9BRF8 314 aaPredicted RBP12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 MMP28Q9H239 520 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 VAPAQ9P0L0 249 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SLAMF8Q9P0V8 285 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 RNF7Q9UBF6 113 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 A6NIZ1 184 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 LGALS8O00214 317 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SCG5P05408 212 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 GPX2P18283 190 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RBM34P42696 430 aaKnown RBP12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 KIR2DS4P43632 304 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RAP1BP61224 184 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 STX1BP61266 288 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RAP1AP62834 184 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 MAB21L1Q13394 359 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 AQP6Q13520 282 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 C11orf91Q3C1V1 193 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CLEC12AQ5QGZ9 265 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 PRAMEF6Q5VXH4 476 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TSPYL5Q86VY4 417 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CMTM4Q8IZR5 234 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 C11orf65Q8NCR3 313 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 GPR32P1Q8NGA4 272 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OR4D11Q8NGI4 311 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TMEM255BQ8WV15 326 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 ST8SIA4Q92187 359 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 APOBEC3DQ96AK3 386 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 ECSITQ9BQ95 431 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OCSTAMPQ9BR26 566 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 FN3KRPQ9HA64 309 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 C20orf141Q9NUB4 165 aa12.64□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 A0A1W2PRD5 423 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 A0A1W2PRF3 423 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 A0A1W2PRM7 423 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 MEIOCA2RUB1 952 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 K7EIL1 84 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 FBP2O00757 339 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 DVL1O14640 695 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 NPFFO15130 113 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 FBXO24O75426 580 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 IGF2P01344 180 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TSPAN19P0C672 248 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CD33P20138 364 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RAD23AP54725 363 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TAS2R41P59536 307 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CTXN1P60606 82 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 METAP1DQ6UB28 335 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CALHM3Q86XJ0 350 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 NKAIN4Q8IVV8 208 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 DTX3Q8N9I9 347 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OR1F12Q8NHA8 337 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 TMEM239Q8WW34 195 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 LIPHQ8WWY8 451 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 MAELQ96JY0 434 aaKnown RBP12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 WDR76Q9H967 626 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 KCNK9Q9NPC2 374 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 THAP1Q9NVV9 213 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 DNAJB11Q9UBS4 358 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 MED31Q9Y3C7 131 aa12.63□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OR6C6A6NF89 314 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OOEPA6NGQ2 149 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 H7C1C5 153 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 GYPAP02724 150 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 DBHP09172 617 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CD200P41217 278 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 LCN6P62502 163 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 HOXA4Q00056 320 aaPredicted RBP12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 MPPED2Q15777 294 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 CYP51A1Q16850 503 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 BEND6Q5SZJ8 279 aaPredicted RBP12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 ZBTB37Q5TC79 503 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 PPP1R35Q8TAP8 253 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 AENQ8WTP8 325 aaKnown RBP12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 OR52B2Q96RD2 323 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 FAM234AQ9H0X4 552 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 IKZF5Q9H5V7 419 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RAB18Q9NP72 206 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SSU72Q9NP77 194 aaKnown RBP12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 HIF3AQ9Y2N7 669 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 GMEB1Q9Y692 573 aa12.62□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 H3BUX3 64 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RGS16O15492 202 aaPredicted RBP12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 IGLL1P15814 213 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 LY6EQ16553 131 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 PAGE3Q5JUK9 113 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 PGBD2Q6P3X8 592 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 PATL1Q86TB9 770 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 NDUFA11Q86Y39 141 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RASSF5Q8WWW0 418 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 SPDL1Q96EA4 605 aa12.61□□□□□ -0.39
NEDD8-MDP1-204ENST00000605847 RANBP3Q9H6Z4 567 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms