RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 IGHV1-69-2A0A0G2JMI3 117 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 LOC100289279A0A1B0GTE1 492 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 LCATP04180 440 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 TUBG1P23258 451 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 ENTPD1P49961 510 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 ECH1Q13011 328 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 AVPI1Q5T686 147 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 TMEM236Q5W0B7 351 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 CCDC121Q6ZUS5 278 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 SPATC1Q76KD6 591 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 UTP4Q969X6 686 aaKnown RBP12.26□□□□□ -0.45
TUBE1-208ENST00000604743 HAVCR1Q96D42 359 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 MSI2Q96DH6 328 aaKnown RBP12.26□□□□□ -0.45
TUBE1-208ENST00000604743 SOX7Q9BT81 388 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 PNRC2Q9NPJ4 139 aaKnown RBP12.26□□□□□ -0.45
TUBE1-208ENST00000604743 TUBG2Q9NRH3 451 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 CENPMQ9NSP4 180 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 AP4S1Q9Y587 144 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 CACNG2Q9Y698 323 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 TANC2Q9HCD6 1990 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 JMJD1CQ15652 2540 aa12.26□□□□□ -0.45
TUBE1-208ENST00000604743 WNT9BO14905 357 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 RP2O75695 350 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 TGFAP01135 160 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 TACSTD2P09758 323 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 ACSM4P0C7M7 580 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 KITLGP21583 273 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 PAICSP22234 425 aaKnown RBP12.25□□□□□ -0.45
TUBE1-208ENST00000604743 CRYBB2P43320 205 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 SLC6A9P48067 706 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 TPTEP56180 551 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 PRSS12P56730 875 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 TMEM33P57088 247 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 MRPS11P82912 194 aaKnown RBP12.25□□□□□ -0.45
TUBE1-208ENST00000604743 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
TUBE1-208ENST00000604743 MVKQ03426 396 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 TAF13Q15543 124 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 HFEQ30201 348 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 KLHL12Q53G59 568 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 SPRNQ5BIV9 151 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 ZMAT1Q5H9K5 638 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 FAM209AQ5JX71 171 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 PLBD1Q6P4A8 553 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 AMIGO2Q86SJ2 522 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 ERI1Q8IV48 349 aaKnown RBP12.25□□□□□ -0.45
TUBE1-208ENST00000604743 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 OR10S1Q8NGN2 331 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 OR6N2Q8NGY6 317 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 OR5K1Q8NHB7 308 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 CCL17Q92583 94 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 SPTSSAQ969W0 71 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 PLEKHA8Q96JA3 519 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 COPS4Q9BT78 406 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 EGLN1Q9GZT9 426 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 PAPOLBQ9NRJ5 636 aaKnown RBP12.25□□□□□ -0.45
TUBE1-208ENST00000604743 CGGBP1Q9UFW8 167 aaPredicted RBP12.25□□□□□ -0.45
TUBE1-208ENST00000604743 ZDHHC8Q9ULC8 765 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 N6AMT1Q9Y5N5 214 aa12.25□□□□□ -0.45
TUBE1-208ENST00000604743 PRR23D1E9PI22 279 aaPredicted RBP12.24□□□□□ -0.45
TUBE1-208ENST00000604743 M0R135 149 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 SURF4O15260 269 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 CRLF1O75462 422 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 HMGN1P05114 100 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 PRR23D2P0DMB1 279 aaPredicted RBP12.24□□□□□ -0.45
TUBE1-208ENST00000604743 RAC2P15153 192 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 FASP25445 335 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 GSTT1P30711 240 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 DAPP51397 102 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 PRKXP51817 358 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 BLVRAP53004 296 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 CDK5Q00535 292 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 HNRNPA0Q13151 305 aaKnown RBP12.24□□□□□ -0.45
TUBE1-208ENST00000604743 EIF2B1Q14232 305 aaKnown RBP12.24□□□□□ -0.45
TUBE1-208ENST00000604743 ATP6AP1Q15904 470 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 LINC01590Q5TEZ4 76 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 FAM166AQ6J272 317 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 Q6ZR03 302 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 BHLHE23Q8NDY6 225 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 CLDND2Q8NHS1 167 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 LRTOMTQ8WZ04 291 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 SLAMF6Q96DU3 332 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 NRBF2Q96F24 287 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 ELMOD3Q96FG2 381 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 ZNF799Q96GE5 643 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 DIRC2Q96SL1 478 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 INTS14Q96SY0 518 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 C1QTNF5Q9BXJ0 243 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 TEX12Q9BXU0 123 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 SEMA6AQ9H2E6 1030 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 KCNS2Q9ULS6 477 aa12.24□□□□□ -0.45
TUBE1-208ENST00000604743 G3V2T6 193 aa12.23□□□□□ -0.45
TUBE1-208ENST00000604743 J3QW42 95 aa12.23□□□□□ -0.45
TUBE1-208ENST00000604743 LMX1BO60663 402 aa12.23□□□□□ -0.45
TUBE1-208ENST00000604743 MITFO75030 526 aaPredicted RBP12.23□□□□□ -0.45
TUBE1-208ENST00000604743 GLCEO94923 617 aa12.23□□□□□ -0.45
TUBE1-208ENST00000604743 TNFSF4P23510 183 aa12.23□□□□□ -0.45
TUBE1-208ENST00000604743 RBMXP38159 391 aaKnown RBP12.23□□□□□ -0.45
TUBE1-208ENST00000604743 CRISP1P54107 249 aa12.23□□□□□ -0.45
TUBE1-208ENST00000604743 RPS7P62081 194 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms