RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 COG8Q96MW5 612 aa13.97□□□□□ -0.17
CCDC12-210ENST00000604181 ZNF582Q96NG8 517 aaPredicted RBP13.97□□□□□ -0.17
CCDC12-210ENST00000604181 TSSK2Q96PF2 358 aa13.97□□□□□ -0.17
CCDC12-210ENST00000604181 NOX4Q9NPH5 578 aa13.97□□□□□ -0.17
CCDC12-210ENST00000604181 LHFPL6Q9Y693 200 aa13.97□□□□□ -0.17
CCDC12-210ENST00000604181 DNAH3Q8TD57 4116 aa13.97□□□□□ -0.17
CCDC12-210ENST00000604181 A0A0G2JND7 137 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 J3QW42 95 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 DCTN6O00399 190 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 PHYHO14832 338 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 TNFRSF13BO14836 293 aaPredicted RBP13.96□□□□□ -0.17
CCDC12-210ENST00000604181 FAM20BO75063 409 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 ANOS1P23352 680 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 RAD23AP54725 363 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 HIST1H3AP68431 136 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 KRR1Q13601 381 aaKnown RBP13.96□□□□□ -0.17
CCDC12-210ENST00000604181 TRAM2Q15035 370 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 ANKDD1AQ495B1 522 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 ZBED5Q49AG3 693 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 HIST2H3PS2Q5TEC6 136 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 CORO6Q6QEF8 472 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 DCDC5Q6ZRR9 648 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 HIST2H3AQ71DI3 136 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 NLRC3Q7RTR2 1065 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 TSEN54Q7Z6J9 526 aaKnown RBP13.96□□□□□ -0.17
CCDC12-210ENST00000604181 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.96□□□□□ -0.17
CCDC12-210ENST00000604181 GLB1L2Q8IW92 636 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 LINC01006Q8NI28 216 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 ACOT11Q8WXI4 607 aaPredicted RBP13.96□□□□□ -0.17
CCDC12-210ENST00000604181 APOBEC3DQ96AK3 386 aaPredicted RBP13.96□□□□□ -0.17
CCDC12-210ENST00000604181 ATP6V1G3Q96LB4 118 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 FNDC11Q9BVV2 318 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 NUAK2Q9H093 628 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 UFSP2Q9NUQ7 469 aa13.96□□□□□ -0.17
CCDC12-210ENST00000604181 M0QZ24 198 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 XKRYO14609 159 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 MRASO14807 208 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 ENSAO43768 121 aaKnown RBP13.95□□□□□ -0.18
CCDC12-210ENST00000604181 KHDRBS3O75525 346 aaKnown RBP13.95□□□□□ -0.18
CCDC12-210ENST00000604181 IFNA14P01570 189 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 FPR3P25089 353 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 GATA4P43694 442 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 RGS6P49758 472 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 PROK1P58294 105 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 FXYD6P3P58550 94 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 ZNF730Q6ZMV8 503 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 COLCA1Q6ZS62 124 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 TMPRSS11FQ6ZWK6 438 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 MBOAT2Q6ZWT7 520 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 NAA40Q86UY6 237 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 TMEM86BQ8N661 226 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 SH3GL1Q99961 368 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 NMNAT1Q9HAN9 279 aaPredicted RBP13.95□□□□□ -0.18
CCDC12-210ENST00000604181 SMURF1Q9HCE7 757 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 TMEM100Q9NV29 134 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 INTS9Q9NV88 658 aaKnown RBP13.95□□□□□ -0.18
CCDC12-210ENST00000604181 VSX1Q9NZR4 365 aaPredicted RBP13.95□□□□□ -0.18
CCDC12-210ENST00000604181 ATPIF1Q9UII2 106 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 RNF114Q9Y508 228 aa13.95□□□□□ -0.18
CCDC12-210ENST00000604181 LRRC30A6NM36 301 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 SOCS2O14508 198 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 AHCYL1O43865 530 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 GPR137BO60478 399 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 EDF1O60869 148 aaKnown RBP13.94□□□□□ -0.18
CCDC12-210ENST00000604181 PTP4A3O75365 173 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 IGHV4-59P01825 116 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 CDKN2AP42771 156 aaKnown RBP13.94□□□□□ -0.18
CCDC12-210ENST00000604181 KCNMB1Q16558 191 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 KRTAP27-1Q3LI81 207 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 SFRP4Q6FHJ7 346 aaPredicted RBP13.94□□□□□ -0.18
CCDC12-210ENST00000604181 ZNF620Q6ZNG0 422 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 C1orf87Q8N0U7 546 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 OR2T12Q8NG77 320 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 OR5L1Q8NGL2 311 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 Q8TCH9 128 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 FAM46AQ96IP4 442 aaKnown RBP13.94□□□□□ -0.18
CCDC12-210ENST00000604181 MAGEB18Q96M61 343 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 TECTBQ96PL2 329 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 COQ7Q99807 217 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 RASSF4Q9H2L5 321 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 NRIP3Q9NQ35 241 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 RPS6KA6Q9UK32 745 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 SIGLEC7Q9Y286 467 aa13.94□□□□□ -0.18
CCDC12-210ENST00000604181 NOTCH3Q9UM47 2321 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 ZNF879B4DU55 563 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 TIMM23O14925 209 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 CLPXO76031 633 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 SDHAP31040 664 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 BPIFB3P59826 476 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC12-210ENST00000604181 KLF10Q13118 480 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 GK2Q14410 553 aaPredicted RBP13.93□□□□□ -0.18
CCDC12-210ENST00000604181 CFAP77Q6ZQR2 320 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 RNF113BQ8IZP6 322 aaKnown RBP13.93□□□□□ -0.18
CCDC12-210ENST00000604181 SSMEM1Q8WWF3 244 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 FAM71F1Q96KD3 344 aaPredicted RBP13.93□□□□□ -0.18
CCDC12-210ENST00000604181 WDFY2Q96P53 400 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 TMEM120AQ9BXJ8 343 aa13.93□□□□□ -0.18
CCDC12-210ENST00000604181 SIRPDQ9H106 197 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms