RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ISYNA1Q9NPH2 558 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 CISD1Q9NZ45 108 aaKnown RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 PSG11Q9UQ72 335 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 X6R8D5 127 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 GXYLT2A0PJZ3 443 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 ANTXRLA6NF34 631 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 HSPB2A8KAH6 182 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 CCL24O00175 119 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 RFXAPO00287 272 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 LEFTY2O00292 366 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 MAGEB4O15481 346 aaPredicted RBP4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 KIAA0513O60268 411 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 PMP2P02689 132 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 TSPAN19P0C672 248 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 KCNE1P15382 129 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 FBLP22087 321 aaKnown RBP4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 KDELR1P24390 212 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 ARR3P36575 388 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 HCCSP53701 268 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 TAS2R39P59534 338 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 HSPB2Q16082 182 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 SIRPB2Q5JXA9 342 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 FAM180AQ6UWF9 173 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 C5orf24Q7Z6I8 188 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 MEX3DQ86XN8 651 aaKnown RBP4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 TRAPPC5Q8IUR0 188 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 KLHDC8BQ8IXV7 354 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 C4orf19Q8IY42 314 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 PELI3Q8N2H9 469 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 ACBD7Q8N6N7 88 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 OR10D4PQ8NGN7 298 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 CCDC107Q8WV48 283 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM239Q8WW34 195 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 FAM3CQ92520 227 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 CMBLQ96DG6 245 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 TEX37Q96LM6 180 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 THAP7Q9BT49 309 aaPredicted RBP4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 CDCA4Q9BXL8 241 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 ZDHHC6Q9H6R6 413 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 DMAC2Q9NW81 257 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 OR14J1Q9UGF5 321 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 MRPS28Q9Y2Q9 187 aaKnown RBP4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 LOXHD1Q8IVV2 1947 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 ALPK3Q96L96 1907 aa4.46□□□□□ -1.69
SPTBN1-206ENST00000602898 LTBP2Q14767 1821 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 TCRBV5S2A0A599 114 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 BHLHE40O14503 412 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 MRASO14807 208 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC2A2P11168 524 aaPredicted RBP4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 CXCL2P19875 107 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 SERPINA2P20848 420 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ZXDBP98169 803 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC10A7Q0GE19 358 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 POM121L1PQ3SYA9 428 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 PYDC2Q56P42 97 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 SUSD4Q5VX71 490 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF774Q6NX45 483 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 C19orf48Q6RUI8 117 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 SCD5Q86SK9 330 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 TMPRSS11BQ86T26 416 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ACOT1Q86TX2 421 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 GLCCI1Q86VQ1 547 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 PARGQ86W56 976 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 LRRC52Q8N7C0 313 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ZSCAN4Q8NAM6 433 aaPredicted RBP4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 NECAP1Q8NC96 275 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 LINC00116Q8NCU8 138 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 OR56A4Q8NGH8 313 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 OR9Q1Q8NGQ5 310 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 OR2T35Q8NGX2 323 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 CD200R1Q8TD46 325 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 APH1BQ8WW43 257 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ASB10Q8WXI3 467 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM234Q8WY98 164 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 GHSRQ92847 366 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 PSMG2Q969U7 264 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 PTH2Q96A98 100 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 P2RY11Q96G91 374 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 WDYHV1Q96HA8 205 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ZFP3Q96NJ6 502 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 MICU1Q9BPX6 476 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 NDC1Q9BTX1 674 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ACTRT3Q9BYD9 372 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ABCG5Q9H222 651 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 SFXN1Q9H9B4 322 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 TRIM36Q9NQ86 728 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 RNF186Q9NXI6 227 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC9A2Q9UBY0 812 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 V9GYY9 64 aa4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 ZFC3H1O60293 1989 aaKnown RBP4.46□□□□□ -1.7
SPTBN1-206ENST00000602898 PPIAL4EA0A075B759 164 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 hCG_1818297A0A087WSY0 165 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A087WUJ7 227 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A096LPI6 279 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A1W2PQ45 241 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A1W2PQY0 241 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 LRP5LA4QPB2 252 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SHISA7A6NL88 538 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 VCYO14598 125 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RAMP3O60896 148 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms