RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	C10orf111	Q8N326	155 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665		Q8TCH9	128 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	SLC26A7	Q8TE54	656 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	ST8SIA4	Q92187	359 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	CFHR4	Q92496	578 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	APOBEC3D	Q96AK3	386 aa	Predicted RBP	10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	ZNF426	Q9BUY5	554 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	CNTD2	Q9H8S5	307 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	FN3KRP	Q9HA64	309 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	SMURF1	Q9HCE7	757 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	RNF7	Q9UBF6	113 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	KPTN	Q9Y664	436 aa		10.1	□□□□□ -0.79
NUP62-223	ENST00000601665	TRAV38-1	A0A0B4J264	116 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	MEIOC	A2RUB1	952 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665		A6NIZ1	184 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	IQCF6	A8MYZ5	107 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665		M0QX08	132 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	NPFF	O15130	113 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	FBXO24	O75426	580 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	CD33	P20138	364 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	KIR2DS4	P43632	304 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	RAD23A	P54725	363 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	TAS2R41	P59536	307 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	RAP1B	P61224	184 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	RAP1A	P62834	184 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	CYP51A1	Q16850	503 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	LRIF1	Q5T3J3	769 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	PRAMEF6	Q5VXH4	476 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	FOXL2NB	Q6ZUU3	175 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	CELF2-AS1	Q8N7Q2	184 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	DTX3	Q8N9I9	347 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	C11orf65	Q8NCR3	313 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	OR1F12	Q8NHA8	337 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	ECSIT	Q9BQ95	431 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	FAM234A	Q9H0X4	552 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	MMP28	Q9H239	520 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	WDR76	Q9H967	626 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	KCNK9	Q9NPC2	374 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	SIRT7	Q9NRC8	400 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	SLAMF8	Q9P0V8	285 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	DNAJB11	Q9UBS4	358 aa		10.09	□□□□□ -0.79
NUP62-223	ENST00000601665	OOEP	A6NGQ2	149 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665		K7EIL1	84 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	FBP2	O00757	339 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	DVL1	O14640	695 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	HOXB9	P17482	250 aa	Predicted RBP	10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	RBM34	P42696	430 aa	Known RBP	10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	CTXN1	P60606	82 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	MAB21L1	Q13394	359 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	AQP6	Q13520	282 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	LY6E	Q16553	131 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	C11orf91	Q3C1V1	193 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	CLEC12A	Q5QGZ9	265 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	CALHM3	Q86XJ0	350 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	MSRB3	Q8IXL7	192 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	GPR32P1	Q8NGA4	272 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	OR4D11	Q8NGI4	311 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	AEN	Q8WTP8	325 aa	Known RBP	10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	TMEM255B	Q8WV15	326 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	TMEM239	Q8WW34	195 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	PRSS27	Q9BQR3	290 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	RAB18	Q9NP72	206 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	C20orf141	Q9NUB4	165 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	VAPA	Q9P0L0	249 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	POLR1D	Q9Y2S0	133 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	MED31	Q9Y3C7	131 aa		10.08	□□□□□ -0.8
NUP62-223	ENST00000601665	OR6C6	A6NF89	314 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665		H3BUX3	64 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665		H7C1C5	153 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	XKRY	O14609	159 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	RGS16	O15492	202 aa	Predicted RBP	10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	PEX14	O75381	377 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	GYPA	P02724	150 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	SCG5	P05408	212 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	DBH	P09172	617 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	GPX2	P18283	190 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	LCN6	P62502	163 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	HOXA4	Q00056	320 aa	Predicted RBP	10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	PRB3	Q04118	309 aa	Predicted RBP	10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	OR8G1	Q15617	311 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	MPPED2	Q15777	294 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	PGBD2	Q6P3X8	592 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	PATL1	Q86TB9	770 aa	Known RBP	10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	PPP1R35	Q8TAP8	253 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	OR52B2	Q96RD2	323 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	NPFFR1	Q9GZQ6	430 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	IKZF5	Q9H5V7	419 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	RERGL	Q9H628	205 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	THAP1	Q9NVV9	213 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	AURKC	Q9UQB9	309 aa		10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	NOP16	Q9Y3C1	178 aa	Known RBP	10.07	□□□□□ -0.8
NUP62-223	ENST00000601665	hCG_1807616	A0A1W2PRN6	198 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms