RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ACSM4P0C7M7 580 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 EPXP11678 715 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 CD40P25942 277 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 DCTDP32321 178 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 SLC6A9P48067 706 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 TPTEP56180 551 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 NAAAQ02083 359 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 EMX1Q04741 257 aaPredicted RBP17.72■□□□□ 0.43
PNKP-215ENST00000600910 MEX3BQ6ZN04 569 aaKnown RBP17.72■□□□□ 0.43
PNKP-215ENST00000600910 NAA40Q86UY6 237 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 ZNF485Q8NCK3 441 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 OR1J2Q8NGS2 313 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 PELI1Q96FA3 418 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 CDH20Q9HBT6 801 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 GRIP1Q9Y3R0 1128 aa17.72■□□□□ 0.43
PNKP-215ENST00000600910 DPRXA6NFQ7 191 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 ZNF35P13682 527 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 PTAFRP25105 342 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 CALCRP30988 508 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 PSMB10P40306 273 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 WNT4P56705 351 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 BSPH1Q075Z2 132 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 TBCEQ15813 527 aaPredicted RBP17.71■□□□□ 0.43
PNKP-215ENST00000600910 EGFL6Q8IUX8 553 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 SVOPQ8N4V2 548 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 ACBD4Q8NC06 268 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 IL17RDQ8NFM7 739 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 DOK1Q99704 481 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 ACOT13Q9NPJ3 140 aa17.71■□□□□ 0.43
PNKP-215ENST00000600910 IGHV2OR16-5A0A0B4J2B6 119 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 TMEM269A0A1B0GVZ9 245 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 SLC2A1P11166 492 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 ZNF121P58317 390 aaPredicted RBP17.7■□□□□ 0.42
PNKP-215ENST00000600910 PSMA6P60900 246 aaKnown RBP17.7■□□□□ 0.42
PNKP-215ENST00000600910 DOC2BQ14184 412 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 MED22Q15528 200 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 ZNF829Q3KNS6 432 aaPredicted RBP17.7■□□□□ 0.42
PNKP-215ENST00000600910 DRAM2Q6UX65 266 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 KLBQ86Z14 1044 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 RORBQ92753 470 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 PLPPR2Q96GM1 343 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 OR5M11Q96RB7 305 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 DCLRE1CQ96SD1 692 aaKnown RBP17.7■□□□□ 0.42
PNKP-215ENST00000600910 ESRP2Q9H6T0 727 aaKnown RBP17.7■□□□□ 0.42
PNKP-215ENST00000600910 BRD7Q9NPI1 651 aa17.7■□□□□ 0.42
PNKP-215ENST00000600910 LSM2Q9Y333 95 aaKnown RBP17.7■□□□□ 0.42
PNKP-215ENST00000600910 A0A087WXM4 84 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 MAGEA13PA6NCF6 341 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 SRSF10O75494 262 aaKnown RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 PNPP00491 289 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 CRYAAP02489 173 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 APOC1P02654 83 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 PCMT1P22061 227 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 WNT5AP41221 380 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 MFGE8Q08431 387 aaPredicted RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 SPOCK1Q08629 439 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 SPHARQ15513 63 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 NCMAPQ5T1S8 102 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 FAM222BQ8WU58 562 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 RNF166Q96A37 237 aaPredicted RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 C4orf45Q96LM5 186 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 KCNS3Q9BQ31 491 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 FAM206AQ9NX38 181 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 BABAM2Q9NXR7 383 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 N6AMT1Q9Y5N5 214 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 R4GMQ9 66 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 E9PI62 339 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 ABCD4O14678 606 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 SIAH2O43255 324 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 LALBAP00709 142 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 LCKP06239 509 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 ANXA2P07355 339 aaKnown RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 ATP6V1B1P15313 513 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 ANOS1P23352 680 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 MMP16P51512 607 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 GTF2A1P52655 376 aaPredicted RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 GBX2P52951 348 aaPredicted RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 BEX5Q5H9J7 111 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 XAF1Q6GPH4 301 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 PRSS45Q7RTY3 260 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 ZNF101Q8IZC7 436 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 PIAS4Q8N2W9 510 aaPredicted RBP17.69■□□□□ 0.42
PNKP-215ENST00000600910 OR51B6Q9H340 312 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 GTF2A1LQ9UNN4 478 aa17.69■□□□□ 0.42
PNKP-215ENST00000600910 LOC110117498-PIK3R3F6TDL0 507 aa17.68■□□□□ 0.42
PNKP-215ENST00000600910 LCATP04180 440 aa17.68■□□□□ 0.42
PNKP-215ENST00000600910 FAM57BQ71RH2 274 aa17.68■□□□□ 0.42
PNKP-215ENST00000600910 SPOCK3Q9BQ16 436 aa17.68■□□□□ 0.42
PNKP-215ENST00000600910 C1QTNF5Q9BXJ0 243 aa17.68■□□□□ 0.42
PNKP-215ENST00000600910 TRIM36Q9NQ86 728 aa17.68■□□□□ 0.42
PNKP-215ENST00000600910 EIF3KQ9UBQ5 218 aaKnown RBP17.68■□□□□ 0.42
PNKP-215ENST00000600910 GCN1Q92616 2671 aaKnown RBP17.67■□□□□ 0.42
PNKP-215ENST00000600910 DEFB108AA8MXU0 73 aa17.67■□□□□ 0.42
PNKP-215ENST00000600910 ATP6V1G2-DDX39BF2Z307 99 aa17.67■□□□□ 0.42
PNKP-215ENST00000600910 NGFP01138 241 aa17.67■□□□□ 0.42
PNKP-215ENST00000600910 FAM157BP0CG42 384 aa17.67■□□□□ 0.42
PNKP-215ENST00000600910 SMIM18P0DKX4 95 aa17.67■□□□□ 0.42
PNKP-215ENST00000600910 MRPL28Q13084 256 aaKnown RBP17.67■□□□□ 0.42
PNKP-215ENST00000600910 SNAI3Q3KNW1 292 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms