RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	SLC30A2	Q9BRI3	323 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	C19orf24	Q9BVV8	132 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	RBM4	Q9BWF3	364 aa	Known RBP	10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	DGCR6L	Q9BY27	220 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	EGLN1	Q9GZT9	426 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	C1orf21	Q9H246	121 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	TMEM106B	Q9NUM4	274 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	PTTG3P	Q9NZH4	202 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	IL19	Q9UHD0	177 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	OPN4	Q9UHM6	478 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872	NPTN	Q9Y639	398 aa		10.76	□□□□□ -0.69
FKRP-223	ENST00000600872		F5H0A9	414 aa	Predicted RBP	10.75	□□□□□ -0.69
FKRP-223	ENST00000600872		H0YL77	283 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	PNP	P00491	289 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	FSHB	P01225	129 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	NOS3	P29474	1203 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	CENPA	P49450	140 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	PRSS12	P56730	875 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	MICA	Q29983	383 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	TUSC1	Q2TAM9	212 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	OR2T5	Q6IEZ7	315 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	RPL13AP3	Q6NVV1	102 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	LRRC28	Q86X40	367 aa	Predicted RBP	10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	DHFR2	Q86XF0	187 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	ADGRG5	Q8IZF4	528 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	LINC00471	Q8N535	108 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	RFLNB	Q8N5W9	214 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	AQP11	Q8NBQ7	271 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	SLC37A3	Q8NCC5	494 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	CCDC197	Q8NCU1	140 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	OR8G5	Q8NG78	346 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	OR2T29	Q8NH02	315 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	RAB39B	Q96DA2	213 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	OR2V2	Q96R30	315 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	WDR76	Q9H967	626 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	GCM1	Q9NP62	436 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	DDX28	Q9NUL7	540 aa	Known RBP	10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	PRPF19	Q9UMS4	504 aa	Known RBP	10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	POLR1D	Q9Y2S0	133 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.75	□□□□□ -0.69
FKRP-223	ENST00000600872		U3KQV3	271 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	TENM1	Q9UKZ4	2725 aa		10.75	□□□□□ -0.69
FKRP-223	ENST00000600872	LOC105371242	A0A075B767	164 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	TMEM178B	H3BS89	294 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	CCNB2	O95067	398 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	VENTX	O95231	258 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	CLU	P10909	449 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	ANPEP	P15144	967 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	PCMT1	P22061	227 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	SRP14	P37108	136 aa	Known RBP	10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	PMEL	P40967	661 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	SEC61A1	P61619	476 aa	Known RBP	10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	SLC3A1	Q07837	685 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	TRAP1	Q12931	704 aa	Known RBP	10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	CRMP1	Q14194	572 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	GK2	Q14410	553 aa	Predicted RBP	10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	ZMYND11	Q15326	602 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	LINC01590	Q5TEZ4	76 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	CD300LD	Q6UXZ3	194 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	TMEM179B	Q7Z7N9	219 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	SEMA6D	Q8NFY4	1073 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	OR10AD1	Q8NGE0	317 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	ASB9	Q96DX5	294 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	FAHD2A	Q96GK7	314 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	TIMD4	Q96H15	378 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	MEGF10	Q96KG7	1140 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	PITX2	Q99697	317 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	ATF6B	Q99941	703 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	GAL3ST1	Q99999	423 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	NIPSNAP1	Q9BPW8	284 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	METTL17	Q9H7H0	456 aa	Predicted RBP	10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	SAMHD1	Q9Y3Z3	626 aa	Known RBP	10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	COMMD3-BMI1	R4GMX3	469 aa		10.74	□□□□□ -0.69
FKRP-223	ENST00000600872	TVP23A	A6NH52	213 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872		F5H5K5	113 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	DYNC1I1	O14576	645 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	SOX14	O95416	240 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	SELE	P16581	610 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	TNFRSF1A	P19438	455 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	MMP16	P51512	607 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	ECH1	Q13011	328 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	MAB21L1	Q13394	359 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	SNAI3	Q3KNW1	292 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	SLC36A3	Q495N2	470 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	TMEM155	Q4W5P6	130 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	OR51L1	Q8NGJ5	315 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	OR5L1	Q8NGL2	311 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	OR9Q1	Q8NGQ5	310 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	OR13G1	Q8NGZ3	307 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	TSSK6	Q9BXA6	273 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	HCAR1	Q9BXC0	346 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	PATZ1	Q9HBE1	687 aa	Known RBP	10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	MMP26	Q9NRE1	261 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	ARMC1	Q9NVT9	282 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	KCNG2	Q9UJ96	466 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	METRN	Q9UJH8	293 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	PPP1R3C	Q9UQK1	317 aa		10.73	□□□□□ -0.69
FKRP-223	ENST00000600872	PPIAL4E	A0A075B759	164 aa		10.72	□□□□□ -0.69

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