RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 MS4A7Q9GZW8 240 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 MYOZ1Q9NP98 299 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 RAB22AQ9UL26 194 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 A0A1B0GTI1 187 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 METTL21EPA6NDL7 271 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 OPN1LWP04000 364 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 SRFP11831 508 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 RAB6AP20340 208 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 PRKACBP22694 351 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 APOBEC1P41238 236 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 SMAD2Q15796 467 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 RNASE10Q5GAN6 216 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 RALGAPA1Q6GYQ0 2036 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 LIN54Q6MZP7 749 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 CARFQ8N187 725 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC25A45Q8N413 288 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC38A9Q8NBW4 561 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 CADM4Q8NFZ8 388 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 OR10S1Q8NGN2 331 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 SEC22AQ96IW7 307 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 WDFY3Q8IZQ1 3526 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 CPED1A4D0V7 1026 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 EFNA2O43921 213 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 CD8AP01732 235 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 FGF2P09038 288 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 TAGLNQ01995 201 aaKnown RBP18■□□□□ 0.47
SHKBP1-225ENST00000600733 BAMBIQ13145 260 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 BTN1A1Q13410 526 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 OVCH2Q7RTZ1 564 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 OR6S1Q8NH40 331 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 EDAQ92838 391 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 FOXRED1Q96CU9 486 aaPredicted RBP18■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC7A5P2Q9GIP4 190 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 WDR13Q9H1Z4 485 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 ZNF107Q9UII5 783 aaPredicted RBP18■□□□□ 0.47
SHKBP1-225ENST00000600733 GPR160Q9UJ42 338 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 MTCH2Q9Y6C9 303 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 ADAMTS20P59510 1910 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 MED12Q93074 2177 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 CEP192Q8TEP8 1941 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 LIPT2A6NK58 231 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 DISC1C4P0D8 188 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 SYT7O43581 403 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 GLB1P16278 677 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 RNF144BQ7Z419 303 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 STPG2Q8N412 459 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 BVESQ8NE79 360 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 OR10H5Q8NGA6 315 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 OR13C9Q8NGT0 318 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 ZBTB8AQ96BR9 441 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 DDIT4LQ96D03 193 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 PDCD10Q9BUL8 212 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 PBOV1Q9GZY1 135 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 SERINC1Q9NRX5 453 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 CYB5R1Q9UHQ9 305 aa18■□□□□ 0.47
SHKBP1-225ENST00000600733 TSPAN4O14817 238 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 TPD52L2O43399 206 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 VSIG8P0DPA2 414 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 GNB3P16520 340 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 QRFPP83859 136 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 PPP1R1AQ13522 171 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 FAM74A1Q5RGS3 127 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 ANKRD37Q7Z713 158 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 NFAM1Q8NET5 270 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 OR1M1Q8NGA1 313 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 SHARPINQ9H0F6 387 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 CST11Q9H112 138 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 ZNF576Q9H609 170 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 SEMA5BQ9P283 1151 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 B3GAT1Q9P2W7 334 aa17.99■□□□□ 0.47
SHKBP1-225ENST00000600733 VSTM2BA6NLU5 285 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 FOSL2P15408 326 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 HSD11B1P28845 292 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 MEF2DQ14814 521 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 ATXN7L3Q14CW9 347 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 TAF13Q15543 124 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 RAB12Q6IQ22 244 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 KLHL24Q6TFL4 600 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 CFAP77Q6ZQR2 320 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 ST8SIA2Q92186 375 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 SPACA5Q96QH8 159 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 PRRT1Q99946 306 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 TMEM185BQ9H7F4 350 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 NPIPB13A6NJU9 1138 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 TMEM200CA6NKL6 621 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 KRBOX1C9JBD0 128 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 NPIPB4C9JG80 1138 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 HPP00738 406 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 HRH1P35367 487 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 CLDN6P56747 220 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 BEX5Q5H9J7 111 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 PHF19Q5T6S3 580 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 TMPRSS9Q7Z410 1059 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 ZBTB44Q8NCP5 570 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 ST8SIA4Q92187 359 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 CHRDQ9H2X0 955 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC2A8Q9NY64 477 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 KLRF1Q9NZS2 232 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC5A6Q9Y289 635 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms