RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 KIF17Q9P2E2 1029 aa13.4□□□□□ -0.26
RPS28-203ENST00000600659 PURGQ9UJV8 347 aaKnown RBP13.4□□□□□ -0.26
RPS28-203ENST00000600659 OAZ3Q9UMX2 235 aa13.4□□□□□ -0.26
RPS28-203ENST00000600659 CUBNO60494 3623 aa13.4□□□□□ -0.26
RPS28-203ENST00000600659 ZAR1LA6NP61 321 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 LILRA1O75019 489 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 HMGN1P05114 100 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 ERCC1P07992 297 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 SPARCP09486 303 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 TUBG1P23258 451 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 SELENOVP59797 346 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CCL8P80075 99 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 EFNB1P98172 346 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 HNRNPA0Q13151 305 aaKnown RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 HLXQ14774 488 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 TRIP10Q15642 601 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CARTPTQ16568 116 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 ARL9Q6T311 187 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CPOQ8IVL8 374 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 SNX33Q8WV41 574 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 APOBEC3DQ96AK3 386 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 HAVCR1Q96D42 359 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CMBLQ96DG6 245 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CENPNQ96H22 339 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 PKP2Q99959 881 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CDADC1Q9BWV3 514 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 TUBG2Q9NRH3 451 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 DYSFO75923 2080 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CCDC182A6NF36 153 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 PRR23D1E9PI22 279 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 M0R129 80 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 PRKYO43930 277 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 TACSTD2P09758 323 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 PRR23D2P0DMB1 279 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 USF1P22415 310 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 ZNF81P51508 661 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 PRSS12P56730 875 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 ESRRGP62508 458 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 MRPS11P82912 194 aaKnown RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 ECH1Q13011 328 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 SNAI3Q3KNW1 292 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 SLX4IPQ5VYV7 408 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 C12orf73Q69YU5 71 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 DPY19L4Q7Z388 723 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 ZDHHC13Q8IUH4 622 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 RDH5Q92781 318 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 SLAMF6Q96DU3 332 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 ZMYND19Q96E35 227 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 CIB1Q99828 191 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 SOX7Q9BT81 388 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 OR51V1Q9H2C8 321 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 MSL2Q9HCI7 577 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 KRT84Q9NSB2 600 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 ZNF275Q9NSD4 429 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 PTTG3PQ9NZH4 202 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CGGBP1Q9UFW8 167 aaPredicted RBP13.39□□□□□ -0.27
RPS28-203ENST00000600659 GPR160Q9UJ42 338 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 CACNG2Q9Y698 323 aa13.39□□□□□ -0.27
RPS28-203ENST00000600659 SAC3D1A6NKF1 404 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 F5H5K5 113 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 M0R135 149 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 PRODHO43272 600 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 SPRY3O43610 288 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 CD5LO43866 347 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 SELENOFO60613 162 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 CD55P08174 381 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 IGHV4-31P0DP07 118 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 RAC2P15153 192 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 ACHEP22303 614 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 GSTT1P30711 240 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 IL2RGP31785 369 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 POLR2IP36954 125 aaKnown RBP13.38□□□□□ -0.27
RPS28-203ENST00000600659 BLVRAP53004 296 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 RIPPLY3P57055 190 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 CDK5R2Q13319 367 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 GGTLC2Q14390 218 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 MOGQ16653 247 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 PCGF3Q3KNV8 242 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 FAM209AQ5JX71 171 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 ERI1Q8IV48 349 aaKnown RBP13.38□□□□□ -0.27
RPS28-203ENST00000600659 OR6N2Q8NGY6 317 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 ZNF799Q96GE5 643 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 COG8Q96MW5 612 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 INTS14Q96SY0 518 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 ABHD6Q9BV23 337 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 OSBPL10Q9BXB5 764 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 GABARAPL3Q9BY60 117 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 CHODLQ9H9P2 273 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 TVP23BQ9NYZ1 205 aa13.38□□□□□ -0.27
RPS28-203ENST00000600659 A0A1B0GWJ7 208 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 LRP5LA4QPB2 252 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 E9PQ18 207 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 WNT9BO14905 357 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 TIMM8AO60220 97 aaPredicted RBP13.37□□□□□ -0.27
RPS28-203ENST00000600659 PAICSP22234 425 aaKnown RBP13.37□□□□□ -0.27
RPS28-203ENST00000600659 IGFBP5P24593 272 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 CRYBB2P43320 205 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 SNAPC1Q16533 368 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 TSTQ16762 297 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms