RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 TIMP3P35625 211 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 SLC6A9P48067 706 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 CX3CR1P49238 355 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 UBE2NP61088 152 aaKnown RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 HIST1H3AP68431 136 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 ENDOGQ14249 297 aaKnown RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 HIST2H3PS2Q5TEC6 136 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 ZNF324BQ6AW86 544 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 MZT2AQ6P582 158 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 CFAP77Q6ZQR2 320 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 HIST2H3AQ71DI3 136 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 NUFIP2Q7Z417 695 aaKnown RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 CATSPERDQ86XM0 798 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 GALNT11Q8NCW6 608 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 OR52H1Q8NGJ2 320 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 OR1F12Q8NHA8 337 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 S100ZQ8WXG8 99 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 ACOT12Q8WYK0 555 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 PGLYRP3Q96LB9 341 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 AMELYQ99218 206 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 SH3GL3Q99963 347 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 PDCD1LG2Q9BQ51 273 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 TCF7L1Q9HCS4 588 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 ZNF391Q9UJN7 358 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 SLC5A6Q9Y289 635 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 SIRT4Q9Y6E7 314 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 DOPEY1Q5JWR5 2465 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 IQCMA0A1B0GVH7 501 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 CIB4A0PJX0 185 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 OR4C45A6NMZ5 311 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 DOK2O60496 412 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 MTRF1O75570 445 aaKnown RBP11.19□□□□□ -0.62
ZNF548-210ENST00000600442 ANXA2P07355 339 aaKnown RBP11.19□□□□□ -0.62
ZNF548-210ENST00000600442 EDN3P14138 238 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 ACHEP22303 614 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 PCSK6P29122 969 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 NTF4P34130 210 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 SDC2P34741 201 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 GALK2Q01415 458 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 MRPL49Q13405 166 aaKnown RBP11.19□□□□□ -0.62
ZNF548-210ENST00000600442 P2RY6Q15077 328 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 WDR38Q5JTN6 314 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 C1QTNF12Q5T7M4 302 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 TMEM211Q6ICI0 200 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 DRAM2Q6UX65 266 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 Q6ZT83 130 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 BEND4Q6ZU67 534 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 CD163Q86VB7 1156 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 COMMD2Q86X83 199 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 C1orf162Q8NEQ5 155 aaPredicted RBP11.19□□□□□ -0.62
ZNF548-210ENST00000600442 SSC4DQ8WTU2 575 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 ITFG2Q969R8 447 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 SLC25A46Q96AG3 418 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 PGAM5Q96HS1 289 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 CEP19Q96LK0 163 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 SLX1AQ9BQ83 275 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 SFXN3Q9BWM7 321 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 PBOV1Q9GZY1 135 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 OR10A2Q9H208 303 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 CXorf56Q9H5V9 222 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 NEK6Q9HC98 313 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 PLSCR4Q9NRQ2 329 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 NUFIP1Q9UHK0 495 aaKnown RBP11.19□□□□□ -0.62
ZNF548-210ENST00000600442 ADAM30Q9UKF2 790 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 ABCA12Q86UK0 2595 aa11.19□□□□□ -0.62
ZNF548-210ENST00000600442 PRR32B1ATL7 298 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 F5H5K5 113 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 UCHL1P09936 223 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 RNF224P0DH78 156 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 COX5BP10606 129 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 CD79AP11912 226 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 OPRM1P35372 400 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 HTR5AP47898 357 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 PRKXP51817 358 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 NANOS3P60323 173 aaKnown RBP11.18□□□□□ -0.62
ZNF548-210ENST00000600442 OTPQ5XKR4 325 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 UNQ6126/PRO20091Q6UXV3 157 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 SKA3Q8IX90 412 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 ELMOD2Q8IZ81 293 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 GCNT2Q8N0V5 402 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 PRSS35Q8N3Z0 413 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 C9orf106Q8NAJ2 232 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 OR13C3Q8NGS6 347 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
ZNF548-210ENST00000600442 SNRNP40Q96DI7 357 aaKnown RBP11.18□□□□□ -0.62
ZNF548-210ENST00000600442 FBXO17Q96EF6 278 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 DCLRE1CQ96SD1 692 aaKnown RBP11.18□□□□□ -0.62
ZNF548-210ENST00000600442 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
ZNF548-210ENST00000600442 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 OR2H1Q9GZK4 316 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 C6orf62Q9GZU0 229 aaPredicted RBP11.18□□□□□ -0.62
ZNF548-210ENST00000600442 HMG20AQ9NP66 347 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 BRD7Q9NPI1 651 aa11.18□□□□□ -0.62
ZNF548-210ENST00000600442 A0A075B6Q4 140 aa11.17□□□□□ -0.62
ZNF548-210ENST00000600442 A1L4Q6 167 aa11.17□□□□□ -0.62
ZNF548-210ENST00000600442 MEGF11A6BM72 1044 aa11.17□□□□□ -0.62
ZNF548-210ENST00000600442 M0R135 149 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms