RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ZNF14	P17017	642 aa	Predicted RBP	19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	HSD11B1	P28845	292 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	APLNR	P35414	380 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	RIDA	P52758	137 aa	Known RBP	19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	LRRN1	Q6UXK5	716 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF584	Q8IVC4	421 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	SYS1	Q8N2H4	156 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	YIPF7	Q8N8F6	280 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	MS4A3	Q96HJ5	214 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	TMEM204	Q9BSN7	226 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	MND1	Q9BWT6	205 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	CLEC4M	Q9H2X3	399 aa	Predicted RBP	19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	NIPAL2	Q9H841	368 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	ELOVL3	Q9HB03	270 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	PNRC2	Q9NPJ4	139 aa	Known RBP	19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	DDX28	Q9NUL7	540 aa	Known RBP	19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	CLEC2D	Q9UHP7	191 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	GNG8	Q9UK08	70 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	RNF115	Q9Y4L5	304 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	OR6C6	A6NF89	314 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026		J3QLW9	94 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	PSMD9	O00233	223 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	PLAU	P00749	431 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	APOC1	P02654	83 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	MT-ND5	P03915	603 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	SERPINA5	P05154	406 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	RPSA	P08865	295 aa	Known RBP	19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	HTR1A	P08908	422 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF19	P17023	458 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	OPRL1	P41146	370 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	IRF3	Q14653	427 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	TP53I3	Q53FA7	332 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	ADAM5	Q6NVV9	412 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF704	Q6ZNC4	412 aa	Predicted RBP	19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	PIAS4	Q8N2W9	510 aa	Predicted RBP	19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	NANOGP1	Q8N7R0	232 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	KBTBD8	Q8NFY9	601 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	OR1J2	Q8NGS2	313 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	OR52N1	Q8NH53	320 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	SPTSSA	Q969W0	71 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF649	Q9BS31	505 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	LRP12	Q9Y561	859 aa		19.02	■□□□□ 0.64
LTBP4-227	ENST00000600026	RAI1	Q7Z5J4	1906 aa	Predicted RBP	19.02	■□□□□ 0.63
LTBP4-227	ENST00000600026	PRR32	B1ATL7	298 aa		19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	STOM	P27105	288 aa		19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	APEX1	P27695	318 aa	Known RBP	19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	GDI2	P50395	445 aa	Known RBP	19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	NAAA	Q02083	359 aa		19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	SPART	Q8N0X7	666 aa		19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	CPEB3	Q8NE35	698 aa	Known RBP	19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	C4orf36	Q96KX1	117 aa		19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	KCNJ15	Q99712	375 aa		19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	MRM2	Q9UI43	246 aa	Known RBP	19.01	■□□□□ 0.63
LTBP4-227	ENST00000600026	MAGEB4	O15481	346 aa	Predicted RBP	19	■□□□□ 0.63
LTBP4-227	ENST00000600026	CALCR	P30988	508 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	TPTE	P56180	551 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	WNT4	P56705	351 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	OR12D2	P58182	307 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	GALK2	Q01415	458 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	MRPL28	Q13084	256 aa	Known RBP	19	■□□□□ 0.63
LTBP4-227	ENST00000600026	TBCE	Q15813	527 aa	Predicted RBP	19	■□□□□ 0.63
LTBP4-227	ENST00000600026	TBC1D28	Q2M2D7	210 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	ZNF684	Q5T5D7	378 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	ZNF283	Q8N7M2	679 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	SLC30A7	Q8NEW0	376 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	HAVCR2	Q8TDQ0	301 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	SPRYD4	Q8WW59	207 aa	Predicted RBP	19	■□□□□ 0.63
LTBP4-227	ENST00000600026	DCLRE1C	Q96SD1	692 aa	Known RBP	19	■□□□□ 0.63
LTBP4-227	ENST00000600026	VCX3A	Q9NNX9	186 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	CRYBG3	Q68DQ2	2970 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	CAD	P27708	2225 aa		19	■□□□□ 0.63
LTBP4-227	ENST00000600026	SHISA9	B4DS77	424 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	ATP6V1G2-DDX39B	F2Z307	99 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026		F5H5K5	113 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	DCTD	P32321	178 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	MAP2K4	P45985	399 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	GBX2	P52951	348 aa	Predicted RBP	18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	KRTAP10-9	P60411	292 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	ZNF829	Q3KNS6	432 aa	Predicted RBP	18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	OR2G6	Q5TZ20	316 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	IL17RD	Q8NFM7	739 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	KCNS3	Q9BQ31	491 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	ISG20L2	Q9H9L3	353 aa	Known RBP	18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	CDH20	Q9HBT6	801 aa		18.99	■□□□□ 0.63
LTBP4-227	ENST00000600026	ABCA4	P78363	2273 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026		M0R135	149 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	RPP14	O95059	124 aa	Known RBP	18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	ABHD16A	O95870	558 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	CRYAA	P02489	173 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	CCNO	P22674	350 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	PRKX	P51817	358 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	EMX1	Q04741	257 aa	Predicted RBP	18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	LIPN	Q5VXI9	398 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	ZNF544	Q6NX49	715 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	SLC22A25	Q6T423	547 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	GATAD2B	Q8WXI9	593 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	FCGR1B	Q92637	280 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	NEUROG1	Q92886	237 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	ZNF799	Q96GE5	643 aa		18.98	■□□□□ 0.63
LTBP4-227	ENST00000600026	RADIL	Q96JH8	1075 aa		18.98	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms