RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CELF2-AS1Q8N7Q2 184 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 HCAR1Q9BXC0 346 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 BEX1Q9HBH7 125 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 LOC100653049A0A140TA62 436 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 F5H5P2 479 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 PTP4A3O75365 173 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 KRT34O76011 436 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 KNG1P01042 644 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 CRYBA1P05813 215 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 TROVE2P10155 538 aaKnown RBP eCLIP17.65■□□□□ 0.42
PNKP-212ENST00000599454 OMGP23515 440 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 HIST1H3AP68431 136 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 DEFB112Q30KQ8 113 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 MIDNQ504T8 468 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 HIST2H3PS2Q5TEC6 136 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 DNM1P34Q6PK57 102 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 C17orf107Q6ZR85 190 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 HIST2H3AQ71DI3 136 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 CBLL1Q75N03 491 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 TMEM86BQ8N661 226 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 WFDC12Q8WWY7 111 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 SIGLEC7Q9Y286 467 aa17.65■□□□□ 0.42
PNKP-212ENST00000599454 MDFIC2A0A1B0GVS7 189 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 FAM181BA6NEQ2 426 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 CXCR6O00574 342 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 ENSAO43768 121 aaKnown RBP17.64■□□□□ 0.41
PNKP-212ENST00000599454 FPR3P25089 353 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 CRABP1P29762 137 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 NPY4RP50391 375 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 OTPQ5XKR4 325 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 WDR25Q64LD2 544 aaPredicted RBP17.64■□□□□ 0.41
PNKP-212ENST00000599454 COLCA1Q6ZS62 124 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 FKBP9P1Q75LS8 142 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 OR11L1Q8NGX0 322 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 Q8TCH9 128 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 SLC7A13Q8TCU3 470 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 TAF15Q92804 592 aaKnown RBP eCLIP17.64■□□□□ 0.41
PNKP-212ENST00000599454 FAM46AQ96IP4 442 aaKnown RBP17.64■□□□□ 0.41
PNKP-212ENST00000599454 NUAK2Q9H093 628 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 KIF17Q9P2E2 1029 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 VWFP04275 2813 aa17.64■□□□□ 0.41
PNKP-212ENST00000599454 NDUFA7O95182 113 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 TXNDC12O95881 172 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 RPS6KA3P51812 740 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 RAG2P55895 527 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 FGF12P61328 243 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 BRD3OSQ6XYD6 125 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 Q6YL49 198 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 DPY19L2P2Q6ZN68 376 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 BHLHE23Q8NDY6 225 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 HSH2DQ96JZ2 352 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 FAM71F1Q96KD3 344 aaPredicted RBP17.63■□□□□ 0.41
PNKP-212ENST00000599454 CMTM6Q9NX76 183 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 LHFPL6Q9Y693 200 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 CAPN7Q9Y6W3 813 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 ENPP4Q9Y6X5 453 aa17.63■□□□□ 0.41
PNKP-212ENST00000599454 A0A1W2PRQ8 180 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 SOCS2O14508 198 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 GSTA4O15217 222 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 SLC22A2O15244 555 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 PSMB10P40306 273 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 PMELP40967 661 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 CD200P41217 278 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 RPL15P61313 204 aaKnown RBP17.62■□□□□ 0.41
PNKP-212ENST00000599454 LIPEQ05469 1076 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 COX10Q12887 443 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 DGCR6Q14129 220 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 KCNJ8Q15842 424 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 FAM201AQ5SY85 155 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 CD276Q5ZPR3 534 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 OLFML2AQ68BL7 652 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 PTCHD4Q6ZW05 846 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 SLC15A3Q8IY34 581 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 RSRC1Q96IZ7 334 aaKnown RBP17.62■□□□□ 0.41
PNKP-212ENST00000599454 KRCC1Q9NPI7 259 aaPredicted RBP17.62■□□□□ 0.41
PNKP-212ENST00000599454 IER3IP1Q9Y5U9 82 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 POMT1Q9Y6A1 747 aa17.62■□□□□ 0.41
PNKP-212ENST00000599454 IGHV3-64DA0A0J9YX35 117 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 P2RY10O00398 339 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 IMPA2O14732 288 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 LIPFP07098 398 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 H1F0P07305 194 aaKnown RBP17.61■□□□□ 0.41
PNKP-212ENST00000599454 ECH1Q13011 328 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 MAB21L1Q13394 359 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 KRTAP27-1Q3LI81 207 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 FIP1L1Q6UN15 594 aaKnown RBP17.61■□□□□ 0.41
PNKP-212ENST00000599454 ZNF841Q6ZN19 808 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 HDXQ7Z353 690 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 KIR3DL3Q8N743 410 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 RCN3Q96D15 328 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 CDADC1Q9BWV3 514 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 VIPAS39Q9H9C1 493 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 RPS6KA6Q9UK32 745 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 AURKCQ9UQB9 309 aa17.61■□□□□ 0.41
PNKP-212ENST00000599454 NOP16Q9Y3C1 178 aaKnown RBP17.61■□□□□ 0.41
PNKP-212ENST00000599454 CLPSL1A2RUU4 121 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 SERPINA1P01009 418 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 HLA-DPB1P04440 258 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 CDKN2AP42771 156 aaKnown RBP17.6■□□□□ 0.41
PNKP-212ENST00000599454 OMPP47874 163 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms