RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TXNDC12O95881 172 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 MT-ND5P03915 603 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 TFAP2AP05549 437 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 GNAO1P09471 354 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 GAAP10253 952 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
SCAF1-203ENST00000598359 RPS6KA3P51812 740 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 ARHGDIAP52565 204 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 RAD23AP54725 363 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 SMIM11AP58511 58 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 SCRN3Q0VDG4 424 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 IL18R1Q13478 541 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 AQP6Q13520 282 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 MOGQ16653 247 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 KRTAP24-1Q3LI83 254 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 CCDC92Q53HC0 331 aaPredicted RBP11.68□□□□□ -0.54
SCAF1-203ENST00000598359 KDM4DQ6B0I6 523 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 LEG1Q6P5S2 330 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 CORO6Q6QEF8 472 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 ADCK1Q86TW2 530 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 OR4K13Q8NH42 304 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 CYGBQ8WWM9 190 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 CCL17Q92583 94 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 NMNAT3Q96T66 252 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 OR52D1Q9H346 318 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 FN3KQ9H479 309 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 ELOVL3Q9HB03 270 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 SRA1Q9HD15 236 aaKnown RBP11.68□□□□□ -0.54
SCAF1-203ENST00000598359 HIF1ANQ9NWT6 349 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 DCAF16Q9NXF7 216 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 NDRG4Q9ULP0 352 aaKnown RBP11.68□□□□□ -0.54
SCAF1-203ENST00000598359 IGLV1-36A0A0B4J1U3 117 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 OR6C6A6NF89 314 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 COX5BP10606 129 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 HIST1H1CP16403 213 aaKnown RBP11.67□□□□□ -0.54
SCAF1-203ENST00000598359 FPR3P25089 353 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 SLC6A6P31641 620 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 SRP14P37108 136 aaKnown RBP11.67□□□□□ -0.54
SCAF1-203ENST00000598359 DVL1P1P54792 670 aaPredicted RBP11.67□□□□□ -0.54
SCAF1-203ENST00000598359 PPP1R8Q12972 351 aaKnown RBP11.67□□□□□ -0.54
SCAF1-203ENST00000598359 SLC35F1Q5T1Q4 408 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 FOXB2Q5VYV0 432 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 FAHD1Q6P587 224 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 UNQ6126/PRO20091Q6UXV3 157 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 HS3ST5Q8IZT8 346 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 OR9Q2Q8NGE9 314 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 OR1F12Q8NHA8 337 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 CMBLQ96DG6 245 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 IFT27Q9BW83 186 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 TOR3AQ9H497 397 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 ZNF665Q9H7R5 613 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 REEP1Q9H902 201 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 FAM118AQ9NWS6 357 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 KLHL21Q9UJP4 597 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 TMCC3Q9ULS5 477 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 POLR1DQ9Y2S0 133 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 WIPI2Q9Y4P8 454 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 LHFPL6Q9Y693 200 aa11.67□□□□□ -0.54
SCAF1-203ENST00000598359 CLDN25C9JDP6 229 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 TFP02787 698 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 MSMBP08118 114 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 ALDH3B2P48448 385 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 GSSP48637 474 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 LSM6P62312 80 aaKnown RBP11.66□□□□□ -0.54
SCAF1-203ENST00000598359 TEKQ02763 1124 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 HLXQ14774 488 aaPredicted RBP11.66□□□□□ -0.54
SCAF1-203ENST00000598359 HFEQ30201 348 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 FAM209AQ5JX71 171 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 CLEC12AQ5QGZ9 265 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 PGBD2Q6P3X8 592 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 ARL9Q6T311 187 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 Q6ZR03 302 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 GLCCI1Q86VQ1 547 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 JAZF1Q86VZ6 243 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 LINC00346Q8IVM7 164 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 OR6V1Q8N148 313 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 SDR9C7Q8NEX9 313 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 OR4C15Q8NGM1 316 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 FBLIM1Q8WUP2 373 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 ELMOD3Q96FG2 381 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 EGLN3Q9H6Z9 239 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 RPRD1BQ9NQG5 326 aaKnown RBP11.66□□□□□ -0.54
SCAF1-203ENST00000598359 TBCCD1Q9NVR7 557 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 PTTG3PQ9NZH4 202 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 PURGQ9UJV8 347 aaKnown RBP11.66□□□□□ -0.54
SCAF1-203ENST00000598359 B9D1Q9UPM9 204 aa11.66□□□□□ -0.54
SCAF1-203ENST00000598359 SAMHD1Q9Y3Z3 626 aaKnown RBP11.66□□□□□ -0.54
SCAF1-203ENST00000598359 OR6C68A6NDL8 312 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 H3BSA7 217 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 WIPF1O43516 503 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 GSTM3P21266 225 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 CRABP1P29762 137 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 HMGA2P52926 109 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 PRSS12P56730 875 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 TNFAIP6P98066 277 aaPredicted RBP11.65□□□□□ -0.54
SCAF1-203ENST00000598359 KCNMB1Q16558 191 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 ZNF620Q6ZNG0 422 aa11.65□□□□□ -0.54
SCAF1-203ENST00000598359 THAP5Q7Z6K1 395 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms