RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 VASH2Q86V25 355 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 DUSP18Q8NEJ0 188 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 OR51D1Q8NGF3 324 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 ULBP2Q9BZM5 246 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 NELFAQ9H3P2 528 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 AUNIPQ9H7T9 357 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 RNF121Q9H920 327 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 N6AMT1Q9Y5N5 214 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 ETV7Q9Y603 341 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 MEIOCA2RUB1 952 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 KLK10O43240 276 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 HPNP05981 417 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 CDK2P24941 298 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 PTH2RP49190 550 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 ART1P52961 327 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 TAF13Q15543 124 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 FAM166AQ6J272 317 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 KRT74Q7RTS7 529 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 LRRC18Q8N456 261 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 CHAC2Q8WUX2 184 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 HAVCR1Q96D42 359 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 ZNF319Q9P2F9 582 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 CKLFQ9UBR5 152 aa15.02■□□□□ -0
SHKBP1-216ENST00000598201 NUFIP1Q9UHK0 495 aaKnown RBP15.02■□□□□ -0
SHKBP1-216ENST00000598201 FAM240BA0A1B0GVZ2 78 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 TTLL8A6PVC2 850 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 SLC17A2O00624 439 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 CTDSPLO15194 276 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 EIF2S3P41091 472 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 EFNB2P52799 333 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF121P58317 390 aaPredicted RBP15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 SPOCK1Q08629 439 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 LINGO2Q7L985 606 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 GALNTL5Q7Z4T8 443 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 MDS2Q8NDY4 140 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 RAB40AQ8WXH6 277 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 INTS12Q96CB8 462 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 S100A16Q96FQ6 103 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 SOX7Q9BT81 388 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 SLC6A15Q9H2J7 730 aa15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF275Q9NSD4 429 aaPredicted RBP15.02□□□□□ -0.01
SHKBP1-216ENST00000598201 APC2O95996 2303 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 A0A1B0GTI1 187 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 GSTZ1O43708 216 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 PTHLHP12272 177 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 BTCP35070 178 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 GUCA1AP43080 201 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 LHX2P50458 406 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 PLET1Q6UQ28 207 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 PLXDC2Q6UX71 529 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 BIVMQ86UB2 503 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 AKAP14Q86UN6 197 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 TMEM251Q8N6I4 163 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 OR8B12Q8NGG6 310 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 OR51E1Q8TCB6 317 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 ABHD3Q8WU67 409 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 SMIM4Q8WVI0 70 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 SLC25A28Q96A46 364 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 PNPLA2Q96AD5 504 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 UPRTQ96BW1 309 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 FGGYQ96C11 551 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 B4GALT7Q9UBV7 327 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 CGGBP1Q9UFW8 167 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 RRP8O43159 456 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 SYT7O43581 403 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 SP1P08047 785 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 CD37P11049 281 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 POU3F4P49335 361 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 GALK2Q01415 458 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 SRYQ05066 204 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 RAB11BQ15907 218 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 SIAH3Q8IW03 269 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 OR1J2Q8NGS2 313 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 FAM3DQ96BQ1 224 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 ADAT3Q96EY9 351 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 NIPAL2Q9H841 368 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 RCE1Q9Y256 329 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 CACNG2Q9Y698 323 aa15.01□□□□□ -0.01
SHKBP1-216ENST00000598201 DMXL2Q8TDJ6 3036 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 ACACAQ13085 2346 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 ZFHX4Q86UP3 3567 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 C5orf63A6NC05 138 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 OR5H15A6NDH6 313 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 NKX2-8O15522 239 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 NME2P1O60361 137 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 NME2P22392 152 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 SLC6A1P30531 599 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 CX3CR1P49238 355 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 CLDN18P56856 261 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 SCAND1P57086 179 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 C2orf76Q3KRA6 126 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 TMEM69Q5SWH9 247 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 RSBN1Q5VWQ0 802 aaPredicted RBP15□□□□□ -0.01
SHKBP1-216ENST00000598201 SLC25A25Q6KCM7 469 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 AAED1Q7RTV5 226 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 ZC3HAV1Q7Z2W4 902 aaKnown RBP15□□□□□ -0.01
SHKBP1-216ENST00000598201 LUZP2Q86TE4 346 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 CPNE4Q96A23 557 aaPredicted RBP15□□□□□ -0.01
SHKBP1-216ENST00000598201 SLC5A6Q9Y289 635 aa15□□□□□ -0.01
SHKBP1-216ENST00000598201 RAXQ9Y2V3 346 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms