RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ACSM4P0C7M7 580 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 SLC25A1P53007 311 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 DBPQ10586 325 aaPredicted RBP8.9□□□□□ -0.98
CCDC9-203ENST00000596938 PPP1R8Q12972 351 aaKnown RBP8.9□□□□□ -0.98
CCDC9-203ENST00000596938 HLXQ14774 488 aaPredicted RBP8.9□□□□□ -0.98
CCDC9-203ENST00000596938 PCK2Q16822 640 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 SPRNQ5BIV9 151 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 TEX30Q5JUR7 227 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 AVPI1Q5T686 147 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 PEG10Q86TG7 708 aaKnown RBP8.9□□□□□ -0.98
CCDC9-203ENST00000596938 LINC00346Q8IVM7 164 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 ADGRG5Q8IZF4 528 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 ZNF283Q8N7M2 679 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 CYB561A3Q8NBI2 242 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 SLC37A3Q8NCC5 494 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 PROKR2Q8NFJ6 384 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 OR8G5Q8NG78 346 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 OR2Z1Q8NG97 314 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 OR13G1Q8NGZ3 307 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 BCAS4Q8TDM0 211 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 ZNF582Q96NG8 517 aaPredicted RBP8.9□□□□□ -0.98
CCDC9-203ENST00000596938 ATF6BQ99941 703 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 NMNAT2Q9BZQ4 307 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 FN3KQ9H479 309 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 PNRC2Q9NPJ4 139 aaKnown RBP8.9□□□□□ -0.98
CCDC9-203ENST00000596938 PTTG3PQ9NZH4 202 aa8.9□□□□□ -0.98
CCDC9-203ENST00000596938 RNF212BA8MTL3 300 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 IQCF6A8MYZ5 107 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 F5H5K5 113 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 IFNL4K9M1U5 179 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 GYG2O15488 501 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 PLPP2O43688 288 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 IGHV2-5P01817 119 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 SELEP16581 610 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 FMO3P31513 532 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 PYCR1P32322 319 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 SRP14P37108 136 aaKnown RBP8.89□□□□□ -0.99
CCDC9-203ENST00000596938 ERFP50548 548 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 BLVRAP53004 296 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 TPTEP56180 551 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 DNAL1Q4LDG9 190 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 OR2T2Q6IF00 324 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 LRRC28Q86X40 367 aaPredicted RBP8.89□□□□□ -0.99
CCDC9-203ENST00000596938 ATG16L2Q8NAA4 619 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 OR10G2Q8NGC3 310 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 OR4Q3Q8NH05 313 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 GIPC3Q8TF64 312 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 CANT1Q8WVQ1 401 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 ZNRF4Q8WWF5 429 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 SPTSSAQ969W0 71 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 CCDC124Q96CT7 223 aaKnown RBP8.89□□□□□ -0.99
CCDC9-203ENST00000596938 SLC7A6OSQ96CW6 309 aaPredicted RBP8.89□□□□□ -0.99
CCDC9-203ENST00000596938 MAP6Q96JE9 813 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 FEVQ99581 238 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 SLC30A2Q9BRI3 323 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 HCAR1Q9BXC0 346 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 DDX28Q9NUL7 540 aaKnown RBP8.89□□□□□ -0.99
CCDC9-203ENST00000596938 TMEM106BQ9NUM4 274 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 TBC1D23Q9NUY8 699 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 NPTNQ9Y639 398 aa8.89□□□□□ -0.99
CCDC9-203ENST00000596938 DHRS12A0PJE2 317 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 IFNGP01579 166 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 LCATP04180 440 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 SPI1P17947 270 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 GATA3P23771 443 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 CPT2P23786 658 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 OTX1P32242 354 aaPredicted RBP8.88□□□□□ -0.99
CCDC9-203ENST00000596938 MALLQ13021 153 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 CRMP1Q14194 572 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 TMEM155Q4W5P6 130 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 FAHD2BQ6P2I3 314 aaPredicted RBP8.88□□□□□ -0.99
CCDC9-203ENST00000596938 NAA40Q86UY6 237 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 RFLNBQ8N5W9 214 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 TEX29Q8N6K0 151 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 PAPD5Q8NDF8 572 aaKnown RBP8.88□□□□□ -0.99
CCDC9-203ENST00000596938 OR10S1Q8NGN2 331 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 ITLN1Q8WWA0 313 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 FAHD2AQ96GK7 314 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 OR2V2Q96R30 315 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 GAL3ST1Q99999 423 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 NIPSNAP1Q9BPW8 284 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 YY1AP1Q9H869 796 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 WDR76Q9H967 626 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 LPAR2Q9HBW0 351 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 GCM1Q9NP62 436 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 G6PC2Q9NQR9 355 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 CMC2Q9NRP2 79 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 TMEM100Q9NV29 134 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 ARMC1Q9NVT9 282 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 PPP1R3CQ9UQK1 317 aa8.88□□□□□ -0.99
CCDC9-203ENST00000596938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.991e-6■□□□□ 11.1
CCDC9-203ENST00000596938 PPIAL4EA0A075B759 164 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 PPIAL4CA0A0B4J2A2 164 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 TVP23AA6NH52 213 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 RIIAD1A6NNX1 92 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 PPIAL4DF5H284 164 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 TMEM178BH3BS89 294 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 J3QLI3 93 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 M0R135 149 aa8.87□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF593O00488 134 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms