RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 EGLN1Q9GZT9 426 aa12.83□□□□□ -0.36
TRIM28-205ENST00000595028 NARFLQ9H6Q4 476 aa12.83□□□□□ -0.36
TRIM28-205ENST00000595028 YY1AP1Q9H869 796 aa12.83□□□□□ -0.36
TRIM28-205ENST00000595028 MSL2Q9HCI7 577 aa12.83□□□□□ -0.36
TRIM28-205ENST00000595028 PDP1Q9P0J1 537 aaPredicted RBP12.83□□□□□ -0.36
TRIM28-205ENST00000595028 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.36
TRIM28-205ENST00000595028 CACNG2Q9Y698 323 aa12.83□□□□□ -0.36
TRIM28-205ENST00000595028 COMMD3-BMI1R4GMX3 469 aa12.83□□□□□ -0.36
TRIM28-205ENST00000595028 TVP23AA6NH52 213 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 H3BN98 237 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 WNT9BO14905 357 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 GSC2O15499 205 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 TGFAP01135 160 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 GYPBP06028 91 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 RAC2P15153 192 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 ZNF823P16415 610 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 SPI1P17947 270 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 GRK5P34947 590 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 ERFP50548 548 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 FBXW12Q6X9E4 464 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 IQCF1Q8N6M8 205 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 LINC01356Q8N9X3 169 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 PAPD5Q8NDF8 572 aaKnown RBP12.82□□□□□ -0.36
TRIM28-205ENST00000595028 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 PTP4A1Q93096 173 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 PTTG3PQ9NZH4 202 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 DNAJB9Q9UBS3 223 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 LPAR3Q9UBY5 353 aa12.82□□□□□ -0.36
TRIM28-205ENST00000595028 CLDN25C9JDP6 229 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 F5H5K5 113 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 ACSM4P0C7M7 580 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 PSKH1P11801 424 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 RPS27P42677 84 aaKnown RBP12.81□□□□□ -0.36
TRIM28-205ENST00000595028 TNFAIP6P98066 277 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-205ENST00000595028 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 HLXQ14774 488 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-205ENST00000595028 RSPO1Q2MKA7 263 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-205ENST00000595028 HFEQ30201 348 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 AVPI1Q5T686 147 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 Q6ZR03 302 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 COLCA1Q6ZS62 124 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 HS3ST5Q8IZT8 346 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 OR10S1Q8NGN2 331 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 SLCO4A1Q96BD0 722 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 HAVCR1Q96D42 359 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 C1QTNF5Q9BXJ0 243 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 SHARPINQ9H0F6 387 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 DDX28Q9NUL7 540 aaKnown RBP12.81□□□□□ -0.36
TRIM28-205ENST00000595028 DYSFO75923 2080 aa12.81□□□□□ -0.36
TRIM28-205ENST00000595028 MEGF8Q7Z7M0 2845 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 FAM157CP0CG43 387 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 CLUP10909 449 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 FMO3P31513 532 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 ENTPD1P49961 510 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 RASSF2P50749 326 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 BLVRAP53004 296 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 MVKQ03426 396 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 PCK2Q16822 640 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 SPRNQ5BIV9 151 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 FAM120AOSQ5T036 256 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 LINC01590Q5TEZ4 76 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 SLC27A4Q6P1M0 643 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 OR6K6Q8NGW6 343 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 TIMD4Q96H15 378 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 BEX2Q9BXY8 128 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 WDR76Q9H967 626 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 ZNF556Q9HAH1 456 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 TREM2Q9NZC2 230 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 WIPI2Q9Y4P8 454 aa12.8□□□□□ -0.36
TRIM28-205ENST00000595028 FAM157AC9JC47 383 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 M0R135 149 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
TRIM28-205ENST00000595028 ATP5HO75947 161 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 SPARCP09486 303 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 ANXA8P13928 327 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 TNFSF4P23510 183 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 LMO4P61968 165 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 SLC3A1Q07837 685 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 KRTAP24-1Q3LI83 254 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 OR2T2Q6IF00 324 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 SHQ1Q6PI26 577 aaKnown RBP12.79□□□□□ -0.36
TRIM28-205ENST00000595028 DCXRQ7Z4W1 244 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 OR5AS1Q8N127 324 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 ZNF511Q8NB15 262 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 OR2Z1Q8NG97 314 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 CCL17Q92583 94 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 SPTSSAQ969W0 71 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 ZNF799Q96GE5 643 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 HCAR1Q9BXC0 346 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 MED20Q9H944 212 aa12.79□□□□□ -0.36
TRIM28-205ENST00000595028 FAM183AA6NL82 134 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 IQCF6A8MYZ5 107 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 B4DSR2 109 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 TIPRLO75663 272 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 LCATP04180 440 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 OSMP13725 252 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 HNF1AP20823 631 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 POU1F1P28069 291 aa12.78□□□□□ -0.36
TRIM28-205ENST00000595028 OTX1P32242 354 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms