RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 KLK3P07288 261 aaPredicted RBP15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 CCKBRP32239 447 aa15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 C3orf33Q6P1S2 294 aa15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 RXFP4Q8TDU9 374 aa15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 C2CD4CQ8TF44 421 aa15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 DEFB126Q9BYW3 111 aa15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 FAM117AQ9C073 453 aa15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 METTL7AQ9H8H3 244 aa15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF629Q9UEG4 869 aaPredicted RBP15.27■□□□□ 0.03
SHKBP1-205ENST00000594973 NUDT19A8MXV4 375 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 AKR7A3O95154 331 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 HLA-DQA2P01906 255 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 CELA2AP08217 269 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 NANOS3P60323 173 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 PPIAP62937 165 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF345Q14585 488 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 RBMS2Q15434 407 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 INPP5JQ15735 1006 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 CSRP2Q16527 193 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 C2orf68Q2NKX9 166 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 Q3ZCU0 254 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 DPY19L4Q7Z388 723 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 KCNRGQ8N5I3 272 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 OR52B4Q8NGK2 314 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 RNF122Q9H9V4 155 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 PPP4R1LQ9P1A2 415 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 KLK11Q9UBX7 282 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 LAMP5Q9UJQ1 280 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 H3BML4 177 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 PYCARD-AS1I3L0S3 204 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 ACOT7O00154 380 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 HLA-DOBP13765 273 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 FAUP35544 74 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 MAGEB1P43366 347 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 RPS11P62280 158 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 SORDQ00796 357 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 ZFP36L1Q07352 338 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 FOXF1Q12946 379 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 EEF1A1P5Q5VTE0 462 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 DTWD2Q8NBA8 298 aa15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 PTRH2Q9Y3E5 179 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-205ENST00000594973 KANTRA0A1W2PQU2 76 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 C5orf52A6NGY3 159 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 PLPP3O14495 311 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 DXOO77932 396 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 UCHL1P09936 223 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 ADCYAP1P18509 176 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 ACHEP22303 614 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 RPL27P61353 136 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 OR7A5Q15622 319 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 RNF212Q495C1 297 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 OR2W3Q7Z3T1 314 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 STK35Q8TDR2 534 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 ST8SIA1Q92185 356 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 TSPAN10Q9H1Z9 355 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 MIOXQ9UGB7 285 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 IKZF2Q9UKS7 526 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 CACNA1CQ13936 2221 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 OR14I1A6ND48 311 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 OR2T1O43869 369 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 OR2F2O95006 317 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 PRF1P14222 555 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 PTH2RP49190 550 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 SNRPEP62304 92 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 OC90Q02509 493 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 OR2F1Q13607 317 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF684Q5T5D7 378 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 DCAF12L2Q5VW00 463 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 FAM220AQ7Z4H9 259 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF546Q86UE3 836 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 CDC20BQ86Y33 519 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 RASL10BQ96S79 203 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 WDR54Q9H977 334 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 MRM2Q9UI43 246 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 PCDHB10Q9UN67 800 aa15.25■□□□□ 0.03
SHKBP1-205ENST00000594973 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 PRSS37A4D1T9 235 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 SLC16A7O60669 478 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 NDUFS6O75380 124 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 ZFPL1O95159 310 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 OPN1LWP04000 364 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 RAB40ALP0C0E4 278 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 PAX6P26367 422 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 PDZK1IP1Q13113 114 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 LIPNQ5VXI9 398 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 JMJD6Q6NYC1 403 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 RAB40AQ8WXH6 277 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 PHYHIPQ92561 330 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 INTS14Q96SY0 518 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 MRI1Q9BV20 369 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 ARRDC1-AS1Q9H2J1 176 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 TXNIPQ9H3M7 391 aa15.24■□□□□ 0.03
SHKBP1-205ENST00000594973 ACOD1A6NK06 481 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 ST8SIA5O15466 376 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 BCL2L11O43521 198 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 UMODP07911 640 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 FBP1P09467 338 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 ZNF41P51814 821 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 BLOC1S1P78537 153 aa15.23■□□□□ 0.03
SHKBP1-205ENST00000594973 TRA2AQ13595 282 aaKnown RBP eCLIP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms